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Description
Describe the bug
When I run the plotting examples from the documentation, e.g. from here, in jupyter lab the generated plots have multiple overlapping elements, including widgets that don't work.
EDIT: The plots look about the same in matplotlib run from ipython. Screenshot added.
To Reproduce
This code is from https://docs.sunpy.org/projects/sunraster/en/latest/data_types/spectrogram.html#plotting:
import numpy as np
data = np.ones((3, 4, 5))
import astropy.wcs
wcs_input_dict = {
'CTYPE1': 'WAVE ', 'CUNIT1': 'Angstrom', 'CDELT1': 0.2, 'CRPIX1': 0, 'CRVAL1': 10, 'NAXIS1': 5,
'CTYPE2': 'HPLT-TAN', 'CUNIT2': 'deg', 'CDELT2': 0.5, 'CRPIX2': 2, 'CRVAL2': 0.5, 'NAXIS2': 4,
'CTYPE3': 'HPLN-TAN', 'CUNIT3': 'deg', 'CDELT3': 0.4, 'CRPIX3': 2, 'CRVAL3': 1, 'NAXIS3': 3}
input_wcs = astropy.wcs.WCS(wcs_input_dict)
from sunraster import SpectrogramCube
my_spectrograms = SpectrogramCube(data, input_wcs)
import astropy.units as u
from astropy.nddata import StdDevUncertainty
uncertainties = StdDevUncertainty(np.sqrt(data))
# Create a mask where all pixels are unmasked, i.e. all mask values are False.
mask = np.zeros_like(data, dtype=bool)
my_spectrograms = SpectrogramCube(data, input_wcs, uncertainty=uncertainties, mask=mask)
my_spectrograms.plot() See next section for screenshot.
Screenshots
In Jupyter Lab notebook
In matplotlib MacOSX backend from ipython
System Details
sunpy Installation Information
General
OS: Mac OS 13.3.1
Arch: 64bit, (arm)
sunpy: 4.1.6
Installation path: /Users/mattcraig/mambaforge/envs/sunraster-dev/lib/python3.11/site-packages/sunpy-4.1.6.dist-info
python: 3.11.3
Required Dependencies
astropy: 5.2.2
numpy: 1.24.3
packaging: 23.1
parfive: 2.0.2
Optional Dependencies
asdf: 2.15.0
asdf-astropy: 0.4.0
beautifulsoup4: 4.12.2
cdflib: Missing cdflib!=0.4.0,>=0.3.19; extra == "timeseries"
dask: Missing dask[array]>=2.0.0; extra == "dask"
drms: Missing drms>=0.6.1; extra == "net"
glymur: Missing glymur!=0.9.0,!=0.9.5,>=0.8.18; extra == "jpeg2000"
h5netcdf: Missing h5netcdf>=0.8.1; extra == "timeseries"
h5py: Missing h5py>=3.1.0; extra == "timeseries"
lxml: Missing lxml>=4.8.0; extra == "jpeg2000"
matplotlib: 3.7.1
mpl-animators: 1.1.0
pandas: Missing pandas>=1.0.0; extra == "timeseries"
python-dateutil: 2.8.2
reproject: Missing reproject; extra == "docs" or "map"
scikit-image: Missing scikit-image>=0.16.0; extra == "image"
scipy: 1.10.1
sqlalchemy: Missing sqlalchemy>=1.3.4; extra == "database"
tqdm: 4.65.0
zeep: Missing zeep>=3.4.0; extra == "net"
Other
ndcube: 2.1.1
Installation method
git checkout
