updated README with OSB instructions

Author: salvadord

README.md

@@ -41,5 +41,32 @@ Requires NEURON with Python and MPI support.
 * /data: where the model and simulation data is stored 
 
 
+## Web-based graphical setup and execution via Open Source Brain (OSB) and NetPyNE GUI
+
+1. Go to the OSB M1 model repository: https://v2.opensourcebrain.org/repositories/60
+
+2. Log in to OSB with your username and password (you can easily register if you don't yet have an account)
+
+3. Once inside the M1 repository, click on "Create New Workspace" and go to this new Workspace when prompted.
+
+4. Once inside the Workspace, click on "Open with ... NetPyNE" (select option from drop-down menu)
+
+5. Once inside the NetPyNE GUI, click on File --> Import --> From Python ...
+
+6. Select the following options:
+    - NetParams file: /home/jovyan/netpyne/workspace/Multiscale model of primary motor cortex (M1) circuits developed in NetPyNE/main/sim/netParams.py
+    - NetParams variable: netParams
+    - SimConfig file: /home/jovyan/netpyne/workspace/Multiscale model of primary motor cortex (M1) circuits developed in NetPyNE/main/sim/netParams.py
+    - SimConfig variable: cfg
+    - Path to mod files: /home/jovyan/netpyne/workspace/Multiscale model of primary motor cortex (M1) circuits developed in NetPyNE/main/sim/mod
+    - Compile mod files: True
+
+    Note: This step will be simplified in an upcoming version of OSB and NetPyNE GUI (early 2023), in which the model will be automatically loaded.
+
+7. You can now graphically explore, simulate and analyze the model structure and outputs.
+    
+    Note: This model requires approximately 2 hours on 96 cores for 1 second of simulation. An upcoming version of OSB / NetPyNE GUI will soon allow you to submit simulations to the Neuroscience Gateway (NSG) and other HPCs. In this version, you can still inspect all the components of the model (populations, cells, connectivity etc) and run smaller scale simulations (e.g. by reducing the cell density of populations) within the up to 4 cores provided currently by OSB. 
+
+
 For further information please contact: salvadordura@gmail.com 
 

sim/README

@@ -2,7 +2,7 @@
 ## Description
 A multiscale model of mouse primary motor cortex (M1)
 
-Developed using NetPyNE (www.neurosimlab.org/netpyne)
+Developed using NetPyNE (http://netpyne.org)
 
 ## Setup and execution