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436 lines (390 loc) · 12.4 KB
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### local variables with unspecified size are 'allocatable'. If they are bound
### to a named symbol, the manifest must mark it as allocatable.
###
### Generally, if an expression produces an array of unspecified size, even if
### it's never bound, it's still 'allocatable'. For example, an inline fortran
### `pack()` call likely still produces a corresponding `malloc()` in the
### generated code, regardless of if the output of `pack()` is bound to
### a symbol (in the case of pack specifically, the malloc is behind a
### _gfortran_pack() call.
###
### We can potentially link/mask `_malloc` and `_free` with a custom one that
### uses R_alloc(), which will automatically free after the .External() call
### returns. We can also pass along -fstack-arrays to gfortran and flang-new
### (llvm), and that will mostly get rid most of the malloc calls, instead
### allocating arrays on the C stack (which will automatically free on
### return/lngjmp), but that will run into issues with larger arrays (especially
### on windows)
###
### local vars of undefined sizes are allocatable. These will typically be
### allocated on the c stack if they are not too large, but may include a
### malloc+free call if they are large. Those might leak if we lngjmp
### away (e.g., due to an interrupt). This potential leak is a non-issue for
### now, since interrupts aren't supported yet, so there is no risk of lngjmp.
###
### When we do add support for interruptable quick functions, this potential
### leak could be guarded against by:
###
### a) linking malloc -> R_alloc() for the fortran compilation unit which
### would make the memory automatically be released after .External()
### return. Note that unlinke malloc(), R_alloc() is not thread safe, so we would need
### additional work for a `do concurrent` context to be supported.
###
### b) forcing all arrays to be stack allocated with -fstack-arrays passed
### to the gfortran/flang-new. This is not a great, since c stack limits are
### typically "small" and enforced by the OS.
logical_as_int <- function(var) {
stopifnot(inherits(var, Variable))
identical(var@mode, "logical") && isTRUE(var@logical_as_int)
}
block_tmp_allocatable_threshold <- 16L
block_tmp_element_count <- function(var) {
stopifnot(inherits(var, Variable))
dims <- var@dims
stopifnot(is.list(dims), length(dims) > 0L)
sizes <- vapply(
dims,
function(axis) {
if (is.integer(axis) && length(axis) == 1L && !is.na(axis)) {
axis
} else {
NA_integer_
}
},
integer(1)
)
if (anyNA(sizes)) {
return(NA_integer_)
}
prod(as.numeric(sizes))
}
block_tmp_allocatable <- function(
var,
scope,
max_stack_elements = block_tmp_allocatable_threshold
) {
stopifnot(inherits(var, Variable))
if (!inherits(scope, "quickr_scope") || !identical(scope@kind, "block")) {
return(FALSE)
}
if (passes_as_scalar(var) || is.null(var@dims)) {
return(FALSE)
}
dims <- dims2f(var@dims, scope)
if (!nzchar(dims) || grepl(":", dims, fixed = TRUE)) {
return(FALSE)
}
n_elements <- block_tmp_element_count(var)
is.na(n_elements) || n_elements > max_stack_elements
}
block_tmp_allocation_lines <- function(vars, scope) {
stopifnot(is.list(vars))
allocs <- lapply(vars, function(var) {
if (!block_tmp_allocatable(var, scope)) {
return(NULL)
}
dims <- dims2f(var@dims, scope)
glue("allocate({var@name}({dims}))")
})
unlist(allocs, use.names = FALSE)
}
scope_vars <- function(scope) {
vars <- as.list(scope)
keep(vars, inherits, what = Variable)
}
iso_c_binding_symbols <- function(
vars,
body_code = "",
logical_is_c_int = logical_as_int,
uses_rng = FALSE
) {
stopifnot(is.list(vars), is_string(body_code), is.function(logical_is_c_int))
used_iso_bindings <- unique(unlist(
use.names = FALSE,
lapply(vars, function(var) {
stopifnot(inherits(var, Variable))
list(
switch(
var@mode,
double = "c_double",
integer = "c_int",
complex = "c_double_complex",
logical = if (isTRUE(logical_is_c_int(var))) "c_int",
raw = "c_int8_t",
stop("unrecognized kind: ", format(var))
),
lapply(var@dims, function(size) {
syms <- all.vars(size)
c(
if (any(grepl("__len_$", syms))) "c_ptrdiff_t",
if (any(grepl("__dim_[0-9]+_$", syms))) "c_int"
)
})
)
})
))
# check for literal kinds used in the body
if (grepl("\\b[0-9]+_c_int\\b", body_code)) {
used_iso_bindings <- union(used_iso_bindings, "c_int")
}
if (grepl("\\bc_int\\b", body_code)) {
used_iso_bindings <- union(used_iso_bindings, "c_int")
}
if (grepl("\\b[0-9]+\\.[0-9]+_c_double\\b", body_code)) {
used_iso_bindings <- union(used_iso_bindings, "c_double")
}
if (grepl("\\bc_ptrdiff_t\\b", body_code)) {
used_iso_bindings <- union(used_iso_bindings, "c_ptrdiff_t")
}
if (isTRUE(uses_rng)) {
used_iso_bindings <- union(used_iso_bindings, "c_double")
}
used_iso_bindings |>
compact() |>
unique() |>
sort(method = "radix")
}
emit_decl_line <- function(
var,
scope,
intent = NULL,
assumed_shape = FALSE,
allow_allocatable = TRUE
) {
stopifnot(inherits(var, Variable))
if (isTRUE(var@host_associated)) {
return(NULL)
}
type <- switch(
var@mode,
double = "real(c_double)",
integer = "integer(c_int)",
complex = "complex(c_double_complex)",
logical = if (logical_as_int(var)) "integer(c_int)" else "logical",
raw = "integer(c_int8_t)",
stop("unrecognized kind: ", format(var))
)
# Block-scoped temporaries are explicitly marked allocatable so we can
# allocate them on the heap rather than relying on compiler defaults.
# GFortran already heap-allocates large/unknown-size locals implicitly,
# but flang lowers block locals to `alloca` and will stack-allocate even
# large runtime shapes, which can segfault under typical stack limits.
# We keep small, fixed-size temps (<= 16 elements) as automatic arrays
# to avoid allocation overhead and leave those to the compiler.
block_allocatable <- allow_allocatable && block_tmp_allocatable(var, scope)
dims <- if (passes_as_scalar(var)) {
NULL
} else if (block_allocatable) {
sprintf("(%s)", str_flatten_commas(rep(":", var@rank)))
} else if (assumed_shape) {
sprintf("(%s)", str_flatten_commas(rep(":", var@rank)))
} else {
dims2f(var@dims, scope) |> str_flatten_commas() |> sprintf(fmt = "(%s)")
}
allocatable <- if (block_allocatable) {
"allocatable"
} else if (
allow_allocatable &&
!assumed_shape &&
!is.null(dims) &&
grepl(":", dims, fixed = TRUE)
) {
"allocatable"
}
name <- var@name
comment <- if (var@mode == "logical") " ! logical"
glue(
'{str_flatten_commas(type, intent, allocatable)} :: {name}{dims}{comment}',
.null = ""
)
}
emit_decls <- function(
vars,
scope,
intents = NULL,
assumed_shape = FALSE,
allow_allocatable = TRUE
) {
stopifnot(is.list(vars))
if (is.null(intents)) {
intents <- rep(list(NULL), length(vars))
names(intents) <- names(vars)
}
Map(
f = emit_decl_line,
var = vars,
intent = intents,
MoreArgs = list(
scope = scope,
assumed_shape = assumed_shape,
allow_allocatable = allow_allocatable
)
) |>
unlist(use.names = FALSE)
}
emit_block <- function(decls, stmts) {
decls <- unlist(decls, use.names = FALSE)
stmts <- unlist(stmts, use.names = FALSE)
glue::trim(glue(
"
block
{indent(str_flatten_lines(decls, \"\", stmts))}
end block
"
))
}
r2f.scope <- function(scope) {
vars <- scope_vars(scope)
vars <- lapply(vars, function(var) {
intent_in <- var@name %in% names(formals(scope@closure))
intent_out <-
(var@name %in% closure_return_var_names(scope@closure)) ||
(intent_in && var@modified)
intent <-
if (intent_in && intent_out) {
"intent(in out)"
} else if (intent_in) {
"intent(in)"
} else if (intent_out) {
"intent(out)"
} else {
NULL
}
type <- switch(
var@mode,
double = "real(c_double)",
integer = "integer(c_int)",
complex = "complex(c_double_complex)",
logical = if (logical_as_int(var)) "integer(c_int)" else "logical",
raw = "integer(c_int8_t)",
stop("unrecognized kind: ", format(var))
)
dims <- if (passes_as_scalar(var)) {
NULL
} else {
dims2f(var@dims, scope) |> str_flatten_commas() |> sprintf(fmt = "(%s)")
}
allocatable <- if (!is.null(dims) && grepl(":", dims, fixed = TRUE)) {
"allocatable"
}
if (intent_in && intent_out && !is.null(allocatable)) {
stop("all input and output vars must have a fully defined shape")
}
name <- var@name
comment <- if (var@mode == "logical") " ! logical"
glue(
'{str_flatten_commas(type, intent, allocatable)} :: {name}{dims}{comment}',
.null = ""
)
})
# vars that will be visible in the C bridge, either as an input or output
non_local_var_names <- unique(c(
names(formals(scope@closure)),
closure_return_var_names(scope@closure)
))
# collect all size_names; sort so non-locals are declared first.
size_names <- unique(unlist(lapply(non_local_var_names, function(name) {
var <- scope[[name]]
lapply(var@dims, all.names, functions = FALSE, unique = TRUE)
}))) |>
setdiff(names(formals(scope@closure)))
if (is.null(size_names)) {
size_names <- character()
}
sizes <- lapply(size_names, function(name) {
kind <- if (endsWith(name, "_len_")) "c_ptrdiff_t" else "c_int"
glue("integer({kind}), intent(in), value :: {name}")
})
manifest <- compact(list(
sizes = sizes,
args = vars[non_local_var_names],
locals = vars[setdiff(names(vars), non_local_var_names)]
))
manifest <- imap(manifest, \(declarations, category) {
str_flatten_lines(paste("!", category), declarations)
}) |>
str_flatten("\n\n")
manifest <- str_flatten_lines("! manifest start", manifest, "! manifest end")
# symbols that must come in as args to the subroutine
# # method="radix" for locale-independent stable order.
signature <- unique(c(
non_local_var_names,
sort(size_names, method = "radix")
))
attr(manifest, "signature") <- signature
manifest
}
## fortran precedence order
## ** (exp)
## * /
## + -
##
## R prededence order
## ^
## - +
## %/% %%
## * /
## generally, we just deparse() to convert an axis size.
## except for NA, which becomes ":"
dims2f_eval_base_env <- new.env(parent = emptyenv())
dims2f_eval_base_env[["("]] <- baseenv()[["("]]
# any call always evaluates to a string.
# every argument will be either:
# - NA -> translates to ":"
# - a symbol -> translates to deparsed string
# - a call ->
dims2f_eval_base_env[["+"]] <- function(e1, e2) glue("({e1} + {e2})")
dims2f_eval_base_env[["-"]] <- function(e1, e2) glue("({e1} - {e2})")
dims2f_eval_base_env[["*"]] <- function(e1, e2) glue("({e1} * {e2})")
dims2f_eval_base_env[["/"]] <- function(e1, e2) glue("real({e1}) / real({e2})")
# dividing integers truncates towards 0
dims2f_eval_base_env[["%/%"]] <- function(e1, e2) glue("int({e1}) / int({e2})")
dims2f_eval_base_env[["%%"]] <- function(e1, e2) {
glue("mod(int({e1}), int({e2}))")
}
dims2f_eval_base_env[["^"]] <- function(e1, e2) glue("({e1})**({e2})")
dims2f_eval_base_env[["abs"]] <- function(x) glue("abs({x})")
dims2f_eval_base_env[["length"]] <- function(x) {
if (is.symbol(x)) {
glue("size({as.character(x)})")
} else {
glue("size({x})")
}
}
dims2f_eval_base_env[["min"]] <- function(...) {
args <- list(...)
glue("min({str_flatten_commas(args)})")
}
dims2f_eval_base_env[["max"]] <- function(...) {
args <- list(...)
glue("max({str_flatten_commas(args)})")
}
dims2f <- function(dims, scope) {
syms <- unique(unlist(lapply(dims, \(d) if (is.language(d)) all.vars(d))))
vars <- as.list(syms)
names(vars) <- syms
eval_env <- list2env(vars, parent = dims2f_eval_base_env)
dims <- map_chr(dims, function(d) {
d <- eval(d, eval_env)
if (is.symbol(d)) {
as.character(d)
} else if (is_wholenumber(d)) {
as.character(d)
} else if (is_scalar_na(d)) {
":"
} else if (is_string(d)) {
d
} else if (inherits(d, Variable)) {
# a locally allocated var that is a return var
if (!d@modified && d@is_arg) {
return(d@name)
}
stop("unexpected axis size value")
}
})
if (!length(dims) || identical(dims, "1")) {
""
} else {
str_flatten_commas(dims)
}
}