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Description
Hi,
Thanks for implementing and such a great package!
I found something unexpected when attempting to visualize a continuous variable as row_side_colors:
library(heatmaply)
mat <- matrix(rnorm(1000), #generate data
ncol=10)
heatmaply(mat,
row_side_colors = c(-50:49), #some easy continuous values to be annotated
Rowv = FALSE)
The mouseover text reveals that the labels are neatly ordered from -50 on the top to 49 on the very bottom. However, the colors seem not in order, there is a hue break between -10 and -9 and then again between -1 and 0 and finally between 9 and 10.
Wouldn't there be a way to tell heatmaply
that this is a continous variable?
Activity
alanocallaghan commentedon Mar 9, 2023
Due to how plotly handles heatmaps we don't really support continuous variables in the side colours at present. Unfortunately I'd have to suggest binning them
jgoldmann commentedon Mar 9, 2023
Ah, I see, then I shall try binning for now.
Would it be an idea to mention this in the manual?
alanocallaghan commentedon Mar 21, 2023
Yes should probably update the docs, although I'll see if I can block a bit of time the next weeks to fix this behaviour in general