Fix go tools

Author: nicolaasuni

VERSION

@@ -1 +1 @@
-5.7.7
+5.7.8

c/doc/Doxyfile

@@ -32,7 +32,7 @@ PROJECT_NAME           = "VariantKey"
 # This could be handy for archiving the generated documentation or
 # if some version control system is used.
 
-PROJECT_NUMBER = 5.7.7
+PROJECT_NUMBER = 5.7.8
 
 # Using the PROJECT_BRIEF tag one can provide an optional one line description
 # for a project that appears at the top of each page and should give viewer

go.mod

@@ -14,5 +14,3 @@ require (
 	github.com/pmezard/go-difflib v1.0.0 // indirect
 	gopkg.in/yaml.v3 v3.0.1 // indirect
 )
-
-tool github.com/jstemmer/go-junit-report/v2

go/Makefile

@@ -165,7 +165,7 @@ test: ensuretarget
 # Get the go tools
 .PHONY: gotools
 gotools:
-	$(GO) get -tool github.com/jstemmer/go-junit-report/v2@latest
+	$(GO) install github.com/jstemmer/go-junit-report/v2@latest
 
 # Update everything
 .PHONY: updateall
@@ -187,6 +187,6 @@ updatelint:
 
 # Update dependencies
 .PHONY: updatemod
-updatemod:
+updatemod: mod
 	$(GO) get -t -u ./... && \
 	$(GO) mod tidy -compat=$(shell grep -oP 'go \K[0-9]+\.[0-9]+' ../go.mod)

python-class/setup.py

@@ -38,7 +38,7 @@ def run(self):
 
 setup(
     name="pyvariantkey",
-    version="5.7.7.0",
+    version="5.7.8.0",
     keywords=("variantkey variant key genetic genomics"),
     description="VariantKey Python wrapper class",
     long_description=read("../README.md"),
@@ -55,7 +55,7 @@ def run(self):
     ],
     install_requires=[
         "numpy>=1.24.2,<2",
-        "variantkey>=5.7.7.0",
+        "variantkey>=5.7.8.0",
     ],
     extras_require={
         "test": [

python/setup.py

@@ -30,7 +30,7 @@ def run(self):
 
 setup(
     name="variantkey",
-    version="5.7.7.0",
+    version="5.7.8.0",
     keywords=("variantkey variant key genetic genomics"),
     description="VariantKey Bindings for Python",
     long_description=read("../README.md"),

r/variantkey/DESCRIPTION

@@ -1,6 +1,6 @@
 Package: variantkey
 Title: Genetic VariantKey
-Version: 5.7.7.0
+Version: 5.7.8.0
 Authors@R: person("Nicola", "Asuni", email = "[email protected]", role = c("aut", "cre"))
 Description: Tools to generate and process a 64 bit Unsigned Integer Keys for Human Genetic Variants.
     The VariantKey is sortable for chromosome and position,