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test_dynamical_model
1 parent e437bb2 commit 3901203Copy full SHA for 3901203
tests/test_basic.py
@@ -18,14 +18,15 @@ def test_einsum():
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def test_dynamical_model():
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adata = scv.datasets.simulation(random_seed=0, n_vars=10)
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scv.pp.filter_and_normalize(adata)
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+ sc.pp.log1p(adata)
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scv.pp.moments(adata)
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em_model = ExpectationMaximizationModel(
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adata=adata, var_names_key=adata.var_names[0]
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)
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em_model.fit(return_model=False, copy=False)
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adata = em_model.export_results_adata(adata)
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- assert np.round(adata[:, adata.var_names[0]].var["fit_alpha"][0], 4) == 4.7409
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+ assert np.round(adata[:, adata.var_names[0]].var["fit_alpha"][0], 4) == 6.4272
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def test_pipeline():
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