Often we want to link the results from DiffBind to differential expression data via the nearest gene to each binding site. Currently this is accomplished using bedops nearest-features via the command line. This requires loading the bedops linux module. Ideally we can break away from this complicated requirement and instead accomplish the same data merge using R packages instead of bash scripts
Often we want to link the results from DiffBind to differential expression data via the nearest gene to each binding site. Currently this is accomplished using
bedops nearest-featuresvia the command line. This requires loading the bedops linux module. Ideally we can break away from this complicated requirement and instead accomplish the same data merge using R packages instead of bash scripts