Merge pull request #132 from thewtex/zarr-python-3-0-0

zarr python 3 0 0

Author: thewtex

.github/workflows/test.yml

@@ -32,13 +32,6 @@ jobs:
           python -m pip install --upgrade pip
           python -m pip install -e ".[tensorstore]"
 
-      - name: Install Zarr Python 3 for OME-Zarr 0.5
-        if:
-          ${{ matrix.python-version != '3.9' && matrix.python-version != '3.10'
-          }}
-        run: |
-          python -m pip install --upgrade --pre "zarr==3.0.0b2"
-
       - name: Test with pytest
         run: |
           pytest --junitxml=junit/test-results.xml

ngff_zarr/to_ngff_zarr.py

@@ -287,6 +287,7 @@ def to_ngff_zarr(
                 mode="a",
                 **zarr_kwargs,
                 **dimension_names_kwargs,
+                **format_kwargs,
             )
 
             shape = image.data.shape
@@ -433,6 +434,7 @@ def to_ngff_zarr(
                             compute=True,
                             return_stored=False,
                             **zarr_kwargs,
+                            **format_kwargs,
                             **dimension_names_kwargs,
                             **kwargs,
                         )
@@ -463,6 +465,7 @@ def to_ngff_zarr(
                     compute=True,
                     return_stored=False,
                     **zarr_kwargs,
+                    **format_kwargs,
                     **dimension_names_kwargs,
                     **kwargs,
                 )