update readme files with URLs

Author: tjparnell

README

@@ -32,8 +32,11 @@ Installation is simple with the Perl Module::Build incantation.
 Released versions may be obtained though the CPAN repository using 
 your favorite package manager. 
 
+Advanced installation notes are provided at
+https://tjparnell.github.io/biotoolbox/AdvancedInstallation.html.
 
-ADDITIONAL MODULES
+
+ADDITIONAL REQUIREMENTS
 
 To make the installation as lean and simple as possible, only the minimal 
 additional Perl modules are required, while the remainder are only 
@@ -44,13 +47,15 @@ separately. See the respective modules for installation instructions.
 
 Most scripts should fail gently with warnings about missing modules.
 
-Advanced installation notes are provided at the project repository.
 
 PROJECT WEBSITE
 
 The BioToolBox project repository may be found at
 https://github.com/tjparnell/biotoolbox. 
 
+Full documentation, including common usage scenarios with the included
+applications, may be found at https://tjparnell.github.io/biotoolbox.
+
 
 LICENSE
 

README.md

@@ -39,7 +39,7 @@ Manual installation is simple with the standard `Module::Build` incantation.
 In either case, this will get you a minimal installation that will work with 
 text files (BED, GFF, GTF, etc), but not binary files. To work with binary files,
 including Bam and BigWig files, see the details in the
-[Installation Guide](https://tjparnell.github.io/biotoolbox/docs/AdvancedInstallation.md).
+[Installation Guide](https://tjparnell.github.io/biotoolbox/AdvancedInstallation.html).
 
 # AUTHOR