Hello!
I'm new in coding (freshly new). I'm using Trackmate-Cellpose in Fiji and I get a problem.
I want to deal with multiple images and get their ROIs in one time, so I use Macro to call run("TrackMate") in a for loop, but I don't know how to set the parameters in format of coding, like 'pretrained model', 'tracking', 'choose an action'. I'm able to do them in GUI, but I don't know how to do this in macro.
Can you tell me how can I run trackmate-cellpose in given parameters and export to ROI manager, in macro, without calling GUI in?
Thank you so much!
Hello!
I'm new in coding (freshly new). I'm using Trackmate-Cellpose in Fiji and I get a problem.
I want to deal with multiple images and get their ROIs in one time, so I use Macro to call run("TrackMate") in a for loop, but I don't know how to set the parameters in format of coding, like 'pretrained model', 'tracking', 'choose an action'. I'm able to do them in GUI, but I don't know how to do this in macro.
Can you tell me how can I run trackmate-cellpose in given parameters and export to ROI manager, in macro, without calling GUI in?
Thank you so much!