Makefile.wynton

all: exdata

install:
	module purge; \
	module load CBI r; \
	Rscript --version; \
	Rscript -e "if (!requireNamespace('ggplot2')) { chooseCRANmirror(ind = 1); install.packages('ggplot2') }"; \
	Rscript -e "if (!requireNamespace('remotes')) { chooseCRANmirror(ind = 1); install.packages('remotes') }"; \
	Rscript -e "remotes::install_github('ucsf-wynton/wyntonquery')"; \
	Rscript -e "packageVersion('wyntonquery')"

debug:
	module purge; \
	module load CBI r; \
	Rscript --version; \
	Rscript -e "packageVersion('wyntonquery')"

users_over_time:
	Rscript -e "library(wyntonquery)" -e "source('incl/users_over_time.R')" -e "ggsave('users_over_time.png', gg, width = 8.0, height = 6.0)"

exdata: inst/exdata/ldap_wynton_dates.txt inst/exdata/ldap_wynton_phi_dates.txt

inst/exdata/ldap_wynton_dates.txt: FORCE
	ldapsearch -H 'ldap://m1,ldap://m2' -x wyntonAccess=TRUE -x -LLL + | grep -E '^(createTimestamp:)' | sed 's/.* //' | sed -E 's/([0-9]{4})([0-9]{2})([0-9]{2}).*/\1-\2-\3/' > "$@"

inst/exdata/ldap_wynton_phi_dates.txt: FORCE
	ldapsearch -H 'ldap://m1,ldap://m2' -x '(&(wyntonAccess=TRUE)(ProtectedAccess=TRUE))' -x -LLL + | grep -E '^(createTimestamp:)' | sed 's/.* //' | sed -E 's/([0-9]{4})([0-9]{2})([0-9]{2}).*/\1-\2-\3/' > "$@"

FORCE: