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Merge pull request #696 from umccr/bugfix/update-icav2-bunches-to-include-dragen-4-4-6
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config/icav2.yaml

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@@ -2783,6 +2783,54 @@ bunches:
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- dataset_name: ora_reference_v2
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dataset_creation_time: '2024-10-30T04:01:43Z'
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dataset_id_hash: 82a4434e4f8e5363842ded1f0a3bcd42
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- bunch_name: dragen_wgts_dna_pipeline_v4_4_6
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bunch_description: |
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Contains the UMCCR dragen-wgts-dna pipeline, and the appropriate reference data for dragen version 4.4.6
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The reference data for both hg38 and chm13v2 are included in this bunch.
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It is recommended to use the graph 'pangenome' for germline alignments / variant calling.
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And to use the 'linear' reference for somatic alignments / variant calling.
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Version for v11-r5 with alt-masked, cnv, hla, rna, and methylation calling enabled features
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tenant_name: umccr-prod
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pipeline_path:
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workflows/dragen-wgts-dna-pipeline/4.4.6/dragen-wgts-dna-pipeline__4.4.6.cwl
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pipeline_project_name: pipelines
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bunch_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
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bunch_region_city_name: Sydney
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projects:
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- development
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- staging
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- production
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categories:
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- dragen
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- wgts
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- dna
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bunch_versions:
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- version: v11_r5
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version_description: |
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This version of the bunch contains the dragen hash table for hg38
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Version for v11-r5 with alt-masked, cnv, hla, rna enabled features
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version_creation_date: 2025-06-17T04:40:46+00:00Z
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datasets:
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- dataset_name:
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dragen_hash_table_chm13_v2_v11_r5_linear_cnv_hla_methyl_cg_methylated_combined_rna
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dataset_creation_time: '2025-06-17T04:15:50Z'
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dataset_id_hash: 708ce72faec7848c6d1cdf0f535fb67b
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- dataset_name:
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dragen_hash_table_chm13_v2_v11_r5_graph_cnv_hla_methyl_cg_rna
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dataset_creation_time: '2025-06-17T04:16:34Z'
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dataset_id_hash: 83ea4297ff053fc2bca74c421d4c993d
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- dataset_name:
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dragen_hash_table_hg38_alt_masked_v11_r5_linear_cnv_hla_methyl_cg_methylated_combined_rna
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dataset_creation_time: '2025-06-17T04:16:53Z'
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dataset_id_hash: ced9651070b46388788332d179ae0ad5
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- dataset_name:
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dragen_hash_table_hg38_alt_masked_v11_r5_graph_cnv_hla_methyl_cg_rna
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dataset_creation_time: '2025-06-17T04:20:20Z'
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dataset_id_hash: 5b020c8890367b47c6e73837f6b6481f
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- dataset_name: ora_reference_v2
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dataset_creation_time: '2024-10-30T04:01:43Z'
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dataset_id_hash: 82a4434e4f8e5363842ded1f0a3bcd42
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# List of generated bundles

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