Remove border objects plugin clear objects which touch image borders and squentially relabelling of image objects
Contact [Hamdah Shafqat Abbasi](mailto: hamdah.abbasi@axleinfo.com) for more information.
For more information on WIPP, visit the official WIPP page.
At the moment this plugin supports label images with two dimensions only. We will add support for higher dimensions later.
a - Original image contains 67 unique label objects b - Image with 16 detected border objects c - Removing Border objects and sequential relabelling
To build the Docker image for the conversion plugin, run
./build-docker.sh.
If WIPP is running, navigate to the plugins page and add a new plugin. Paste the
contents of plugin.json into the pop-up window and submit.
This plugin takes two input arguments and 1 output argument:
| Name | Description | I/O | Type |
|---|---|---|---|
--inpDir |
Input image directory | Input | collection |
--pattern |
Filepattern to parse image files | Input | string |
--outDir |
Output collection | Output | collection |