fix components

Author: rcannood

src/test/resources/testnextflowvdsl3/src/integer_as_double/config.vsh.yaml

@@ -1,25 +1,26 @@
-functionality:
-  name: integer_as_double
-  arguments:
-    - name: "--input"
-      type: file
-      required: true
-      example: input.txt
-    - name: "--output"
-      type: file
-      required: true
-      direction: output
-      example: output.txt
-    - name: "--double"
-      type: double
-      required: true
-      direction: input
-      example: 10.5
-  resources:
-    - type: bash_script
-      path: script.sh
-platforms:
+name: integer_as_double
+arguments:
+  - name: "--input"
+    type: file
+    required: true
+    example: input.txt
+  - name: "--output"
+    type: file
+    required: true
+    direction: output
+    example: output.txt
+  - name: "--double"
+    type: double
+    required: true
+    direction: input
+    example: 10.5
+resources:
+  - type: bash_script
+    path: script.sh
+engines:
   - type: native
   - type: docker
     image: nextflow/bash:latest
+runners:
+  - type: executable
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/multiple_emit_channels/config.vsh.yaml

@@ -27,5 +27,7 @@ resources:
 dependencies:
   - name: step1
   - name: step3
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/multiple_output/config.vsh.yaml

@@ -1,24 +1,25 @@
-functionality:
-  name: multiple_output
-  arguments:
-    - name: "--input"
-      type: file
-      multiple: true
-      required: true
-      example: input.txt
-      multiple_sep: ";"
-    - name: "--output"
-      type: file
-      required: true
-      direction: output
-      multiple: true
-      multiple_sep: ";"
-      example: output_*.txt
-  resources:
-    - type: bash_script
-      path: script.sh
-platforms:
+name: multiple_output
+arguments:
+  - name: "--input"
+    type: file
+    multiple: true
+    required: true
+    example: input.txt
+    multiple_sep: ";"
+  - name: "--output"
+    type: file
+    required: true
+    direction: output
+    multiple: true
+    multiple_sep: ";"
+    example: output_*.txt
+resources:
+  - type: bash_script
+    path: script.sh
+engines:
   - type: native
   - type: docker
     image: nextflow/bash:latest
+runners:
+  - type: executable
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/sub_workflow/config.vsh.yaml

@@ -21,5 +21,7 @@ resources:
     entrypoint: base
 dependencies:
   - name: step1
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/test_wfs/alias/config.vsh.yaml

@@ -10,5 +10,7 @@ dependencies:
   - name: step1
   - name: step1
     alias: step1_alias
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/test_wfs/concurrency/config.vsh.yaml

@@ -10,5 +10,7 @@ dependencies:
   - name: step1
   - name: step2
   - name: step3
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/test_wfs/filter_runif/config.vsh.yaml

@@ -10,5 +10,7 @@ dependencies:
   - name: step1
   - name: step2
   - name: step3
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/test_wfs/fromstate_tostate/config.vsh.yaml

@@ -10,5 +10,7 @@ dependencies:
   - name: step1
   - name: step2
   - name: step3
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/test_wfs/invalid_fromstate_argument/config.vsh.yaml

@@ -8,5 +8,7 @@ resources:
   - path: ../../../resources
 dependencies:
   - name: sub_workflow
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow

src/test/resources/testnextflowvdsl3/src/test_wfs/invalid_tostate_argument/config.vsh.yaml

@@ -8,5 +8,7 @@ resources:
   - path: ../../../resources
 dependencies:
   - name: sub_workflow
-platforms:
+engines:
+  - type: native
+runners:
   - type: nextflow