- generates: sdc.api.Spectrum2D
Loads the spectra in Bruker OPUS format.
usage: from-opus [-h] [-l {DEBUG,INFO,WARNING,ERROR,CRITICAL}]
[-N LOGGER_NAME] [--instrument INSTRUMENT] [--format FORMAT]
[--keep_format] [-i [INPUT ...]] [-I [INPUT_LIST ...]]
[--resume_from RESUME_FROM] [--sample_id SAMPLE_ID]
[-s START] [-m MAX] [--add_trace_to_report]
Loads the spectra in Bruker OPUS format.
options:
-h, --help show this help message and exit
-l {DEBUG,INFO,WARNING,ERROR,CRITICAL}, --logging_level {DEBUG,INFO,WARNING,ERROR,CRITICAL}
The logging level to use. (default: WARN)
-N LOGGER_NAME, --logger_name LOGGER_NAME
The custom name to use for the logger, uses the plugin
name by default (default: None)
--instrument INSTRUMENT
The instrument this data is from (default: unknown)
--format FORMAT The spectral data format to set (default: NIR)
--keep_format Will keep the format that the reader determines rather
than the supplied one. (default: False)
-i [INPUT ...], --input [INPUT ...]
Path to the OPUS file(s) to read; glob syntax is
supported; Supported variables: {HOME}, {CWD}, {TMP}
(default: None)
-I [INPUT_LIST ...], --input_list [INPUT_LIST ...]
Path to the text file(s) listing the OPUS files to
use; Supported variables: {HOME}, {CWD}, {TMP}
(default: None)
--resume_from RESUME_FROM
Glob expression matching the file to resume from,
e.g., '*/012345.0' (default: None)
--sample_id SAMPLE_ID
ID|Field1|Field2|Field3|[prefix] (default: SNM)
-s START, --start START
The spectrum number to start loading from (default: 1)
-m MAX, --max MAX The maximum number of spectra to load, -1 for all
(default: -1)
--add_trace_to_report
If enabled the trace of identified blocks etc gets
added to the report, using prefix 'Trace.' (default:
False)
Available variables:
{HOME}: The home directory of the current user.{CWD}: The current working directory.{TMP}: The temp directory.