Rename make_pca_plot to pca_plot and update usage #202
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| on: | |
| push: | |
| branches: main | |
| name: Quarto Publish | |
| jobs: | |
| build-deploy: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| id-token: write | |
| pages: write | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - name: Setup GitHub Pages | |
| uses: actions/configure-pages@v3 | |
| - name: Set up Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| - name: Set up LaTeX dependencies | |
| run: quarto install tinytex | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y \ | |
| fonts-noto \ | |
| fontconfig \ | |
| pandoc \ | |
| libproj-dev \ | |
| libgdal-dev \ | |
| libudunits2-dev \ | |
| libfreetype6-dev \ | |
| libpng-dev \ | |
| librsvg2-bin \ | |
| gdal-bin \ | |
| libcurl4-openssl-dev \ | |
| libfontconfig1-dev \ | |
| libx11-dev | |
| sudo fc-cache -fv | |
| - name: Install R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.5' | |
| - name: Install R Dependencies | |
| uses: r-lib/actions/setup-renv@v2 | |
| with: | |
| cache-version: 1 | |
| - name: Render | |
| uses: quarto-dev/quarto-actions/render@v2 | |
| with: | |
| to: all | |
| - name: Upload Artifact | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: ./_book | |
| - name: Deploy to Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v4 |