Adding .zenodo.json file for Zenodo integration #1419
Workflow file for this run
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| name: CI Tests | |
| on: | |
| push: | |
| branches: | |
| - "main" | |
| tags: | |
| - "*" | |
| pull_request: | |
| workflow_dispatch: | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| max-parallel: 5 | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Install Conda environment with Micromamba | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| cache-environment: true | |
| cache-environment-key: env-envkey-${{ github.sha }}-${{ github.run_attempt }} | |
| environment-file: environment.yml | |
| environment-name: xpsipy3 | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| - name: mamba installs | |
| run: | | |
| micromamba install flake8 pytest h5py "ultranest>=4.0" | |
| - name: Set up GCC | |
| run: | | |
| sudo apt-get install -y gcc | |
| shell: bash -l {0} | |
| - name: install gsl | |
| run: | | |
| sudo apt-get install -y libgsl-dev | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| #- name: multinest and pymultinest install (seems working but the pytest below still cannot find the MultiNest library files) | |
| # run: | | |
| # sudo apt-get install cmake libblas-dev liblapack-dev libatlas-base-dev | |
| # sudo apt install mpich | |
| # git clone https://github.com/farhanferoz/MultiNest.git multinest | |
| # cd multinest/MultiNest_v3.12_CMake/multinest/ | |
| # mkdir build | |
| # cd build | |
| # CC=gcc FC=mpif90 CXX=g++ cmake -DCMAKE_{C,CXX}_FLAGS="-O3 -march=native -funroll-loops" -DCMAKE_Fortran_FLAGS="-O3 -march=native -funroll-loops" .. | |
| # make | |
| # cd ../../../../ | |
| # git clone https://github.com/JohannesBuchner/PyMultiNest.git pymultinest | |
| # cd pymultinest | |
| # python setup.py install | |
| # cd .. | |
| # export LD_LIBRARY_PATH=$(pwd)/multinest/MultiNest_v3.12_CMake/multinest/lib/:$LD_LIBRARY_PATH | |
| # echo $LD_LIBRARY_PATH | |
| - name: install X-PSI package | |
| run: | | |
| pip install . | |
| shell: bash -l {0} | |
| env: | |
| CC: gcc | |
| - name: Test with pytest | |
| run: | | |
| pytest |