@@ -71,28 +71,28 @@ The trackplot is written in Python, and user could install it in a variety of wa
71712 . using docker image
7272
7373 ``` bash
74- docker pull ygidtu/sashimi
75- docker run --rm ygidtu/sashimi --help
74+ docker pull ygidtu/trackplot
75+ docker run --rm ygidtu/trackplot --help
7676
7777 # or build docker image from source
78- git clone https://github.com/ygidtu/trackplot sashimi
79- cd sashimi
78+ git clone https://github.com/ygidtu/trackplot trackplot
79+ cd trackplot
8080 docker build -t ygidtu/docker .
81- docker run --rm ygidtu/sashimi --help
81+ docker run --rm ygidtu/trackplot --help
8282 ```
8383
84843. install from source code
8585
8686 ` ` ` bash
87- git clone https://github.com/ygidtu/trackplot sashimi
88- cd sashimi
87+ git clone https://github.com/ygidtu/trackplot trackplot
88+ cd trackplot
8989 pip install -r requirements.txt
9090 python setup.py install
9191
9292 # optional, enable bigWig, bigBed and hicMatrix support
9393 pip install pybigwig hicmatrix
9494
95- sashimipy --help
95+ trackplot --help
9696 # or
9797 python main.py --help
9898 ` ` `
@@ -103,12 +103,12 @@ The trackplot is written in Python, and user could install it in a variety of wa
103103 # conda install -c bioconda -c conda-forge trackplot
104104
105105 # or install trackplot into an isolated environments
106- conda create -n sashimi -c bioconda -c conda-forge trackplot
106+ conda create -n trackplot -c bioconda -c conda-forge trackplot
107107
108108 # or install latest trackplot
109- git clone https://github.com/ygidtu/trackplot.git sashimi
110- cd sashimi
111- conda create -n sashimi -f environment.yaml
109+ git clone https://github.com/ygidtu/trackplot.git trackplot
110+ cd trackplot
111+ conda create -n trackplot -f environment.yaml
112112 ` ` `
113113
1141145. for ` pipenv` or ` poetry` users
@@ -147,8 +147,8 @@ The trackplot is written in Python, and user could install it in a variety of wa
147147 Install trackplot before set up the web server
148148
149149 ` ` ` bash
150- git clone https://github.com/ygidtu/trackplot sashimi
151- cd sashimi /web
150+ git clone https://github.com/ygidtu/trackplot trackplot
151+ cd trackplot /web
152152
153153 # build the frontend static files
154154 npm install -g vue-cli vite && npm install
@@ -164,7 +164,7 @@ The trackplot is written in Python, and user could install it in a variety of wa
164164# # Example
165165
166166The ` example` folder is downloaded from [here.](https://github.com/ygidtu/trackplot/archive/refs/heads/main.zip)
167- And a more detailed tutorial could be found at [here.](https://sashimi .readthedocs.io/en/latest/)
167+ And a more detailed tutorial could be found at [here.](https://trackplot .readthedocs.io/en/latest/)
168168
169169` ` ` bash
170170
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