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Verification, large #2310

Verification, large

Verification, large #2310

Workflow file for this run

name: Verification, large
on:
# Trigger the workflow on push or pull request
push:
pull_request: # DANGEROUS! MUST be disabled for self-hosted runners!
# Trigger the workflow by cron. The default time zone of GitHub Actions is UTC.
schedule:
- cron: '0 13 * * *'
# Trigger the workflow manually
workflow_dispatch:
inputs:
git-ref:
description: Git Ref (Optional)
required: false
random-seed:
description: Random Seed (Optional)
required: false
# Show the git ref in the workflow name if it is invoked manually.
run-name: ${{ github.event_name == 'workflow_dispatch' && format('Manual run {0} , seed {1}', inputs.git-ref, inputs.random-seed) || '' }}
jobs:
test:
name: Verify PRIMA.
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
matlab: [latest]
solver: [newuoa, cobyla, lincoa, bobyqa, uobyqa]
dim: [large]
use_system_libgcc: [true, false] # Whether to use the system libgcc or the one shipped with MATLAB.
steps:
- name: Run `sudo apt update`
run: sudo apt update || true # Otherwise, free-disk-space or other actions relying on `apt` may fail
- name: Free disk space
uses: jlumbroso/free-disk-space@main
if: startsWith(matrix.os, 'ubuntu')
with:
# all of these default to true, but feel free to set to "false" if necessary for your workflow
android: true
dotnet: true
haskell: true
large-packages: true
docker-images: true
swap-storage: false # Important, or the runner may be shut down due to memory starvation.
- name: Clone Repository (Latest)
uses: actions/checkout@v6.0.2
if: github.event.inputs.git-ref == ''
with:
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
submodules: recursive
- name: Clone Repository (Custom Ref)
uses: actions/checkout@v6.0.2
if: github.event.inputs.git-ref != ''
with:
ref: ${{ github.event.inputs.git-ref }}
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
submodules: recursive
- name: Miscellaneous setup
run: bash .github/scripts/misc_setup
- name: Clone MatCUTEst
uses: actions/checkout@v6.0.2
with:
ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
repository: matcutest/matcutest_compiled
path: matcutest
- name: Set up gfortran on Linux
if: startsWith(matrix.os, 'ubuntu')
uses: fortran-lang/setup-fortran@main
with:
compiler: gcc
version: latest
- name: Check gfortran version on Linux
if: startsWith(matrix.os, 'ubuntu')
run: which gcc && gcc --version && which gfortran && gfortran --version
- name: Set up MATLAB
uses: matlab-actions/setup-matlab@v2.6.1
with:
release: ${{ matrix.matlab }}
cache: true
products: Parallel_Computing_Toolbox
- name: Link system libgcc to MATLAB if needed
if: startsWith(matrix.os, 'ubuntu')
shell: bash
run: |
matlab_root=$(realpath $(dirname $(which matlab))/../)
echo "MATLAB root is ${matlab_root}"
matlab_libgcc="${matlab_root}/sys/os/glnxa64/libgcc_s.so.1"
echo "MATLAB libgcc is:"
ls -alh ${matlab_libgcc} || exit 42
echo "gcc strings in MATLAB libgcc are:"
strings ${matlab_libgcc} | grep -iE "^GCC_"
echo "latest gcc version string in MATLAB libgcc is:"
readelf -V ${matlab_libgcc} | grep -oiE 'GCC_([0-9]+)(.[0-9]+){0,2}' | sort -V | tail -1
system_libgcc="/usr/lib/x86_64-linux-gnu/libgcc_s.so.1"
echo "System libgcc is:"
ls -alh ${system_libgcc} || exit 42
echo "gcc strings in system libgcc are:"
strings ${system_libgcc} | grep -iE "^GCC_"
echo "latest gcc version string in system libgcc is:"
readelf -V ${system_libgcc} | grep -oiE 'GCC_([0-9]+)(.[0-9]+){0,2}' | sort -V | tail -1
if [[ "${{ matrix.use_system_libgcc }}" == "true" ]] ; then
ln -sf ${system_libgcc} ${matlab_libgcc} || exit 42
echo "Linked ${system_libgcc} to ${matlab_libgcc}."
else
echo "Keep ${matlab_libgcc} untouched."
fi
echo "After the operation, MATLAB libgcc is:"
ls -alh ${matlab_libgcc} || exit 42
echo "gcc strings in MATLAB libgcc are:"
strings ${matlab_libgcc} | grep -iE "^GCC_"
echo "latest gcc version string in MATLAB libgcc is:"
readelf -V ${matlab_libgcc} | grep -oiE 'GCC_([0-9]+)(.[0-9]+){0,2}' | sort -V | tail -1
- name: Revise get_solvers.m to print the revised header file
run: |
cd matlab/tests/private || exit 1
$SEDI "s|\(^.*\)\(setup(solver.*$\)|\1header_file\n\1system(['cat ', header_file]);\n\1\2|" get_solvers.m
- name: Revise setup_compiler_options.m to print the revised mexopt file
run: |
cd matlab/tests/private || exit 1
$SEDI "s|return|for ifile = 1 : length(config_files), ifile, cfile = fullfile(config_dir, config_files{ifile}) , system(['cat ', cfile]); end|" set_compiler_options.m
- name: Revise getMexLibgcc and compiled.m to print necessary information
shell: bash
run: |
cd matlab/setup_tools || exit 42
$SEDI 's|\(.*lddOut.*\);|\1|' getMexLibgcc.m
$SEDI 's|\(.*Path.*\);|\1|' getMexLibgcc.m
$SEDI 's|\(.*String.*\);|\1|' getMexLibgcc.m
$SEDI 's|\(.*Version.*\);|\1|' getMexLibgcc.m
cat getMexLibgcc.m
$SEDI 's|\(common_mex_options\s*=\s*.*$\)$|\1\ncommon_mex_options{:}|' compile.m
$SEDI 's|\(.*\s*=\s*getMexLibgcc().gccVersion.*\)|\1\ngetMexLibgcc() |' compile.m
$SEDI 's|\(.*_version\s*=\s*.*\);|\1 |' compile.m
$SEDI 's|\(compiler_options\s*=\s*.*\);|\1 |' compile.m
$SEDI "s|\(if\s*~support_internal_procedures\)|verLessThan('matlab', '25.1'), verLessThan('matlab', '25.2'), compiler_manufacturer, compiler_options, support_internal_procedures\n\1|" compile.m
cat compile.m
- name: Conduct the test; treat timeout as SUCCESS (exit 0)
uses: equipez/run-matlab-command@v2
with:
timelimit: 320m
command: |
ver;
root_dir = pwd();
cd(fullfile(root_dir, 'matcutest')); install(); which macup
cd(fullfile(root_dir, 'matlab/tests'));
options = struct();
options.verbose = true;
options.no_classical = true; % We do not test the classical mode on "large" problems.
if ~isempty('${{ inputs.random-seed }}')
options.seed = str2num('${{ inputs.random-seed }}');
else
copyfile('private/year_week.m', cd());
options.seed = year_week('Asia/Shanghai');
end
options
verify('${{ matrix.solver }}', '${{ matrix.dim }}', options);
cd(root_dir); setup path; setup clean; setup uninstall % Test that `setup` works properly.
- name: List problems that started but did not end
# The solver got stuck when solving these problems. Investigate what happened.
if: always()
shell: bash
run: |
solver=${{ matrix.solver }}
cd /tmp/${solver}_verify_prima/
ls -R1 *${solver}*_start > ${solver}_prob_start
ls -R1 *${solver}*_end > ${solver}_prob_end
diff ${solver}_prob_start ${solver}_prob_end > ${solver}_stuck || :
printf "\n\n>>>>>>>>>>>>>>>>\nProblems that started but did not end:\n\n"
cat ${solver}_stuck
printf "\n<<<<<<<<<<<<<<<<\n\n"
- name: Store artifacts
uses: actions/upload-artifact@v7
if: always() # Always run even if the workflow is canceled manually or due to overtime.
with:
name: artifact-${{ matrix.solver }}-${{ matrix.dim }}-${{ matrix.matlab }}-${{ matrix.use_system_libgcc }}-${{ matrix.os }}
path: |
/tmp/${{ matrix.solver }}_verify_prima/*prob_start*
/tmp/${{ matrix.solver }}_verify_prima/*prob_end*
/tmp/${{ matrix.solver }}_verify_prima/*stuck*
/tmp/${{ matrix.solver }}_verify_prima/fort.*