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Recursive test, MATLAB #342

Recursive test, MATLAB

Recursive test, MATLAB #342

name: Recursive test, MATLAB
on:
# Trigger the workflow on push or pull request
#push:
#pull_request: # DANGEROUS! MUST be disabled for self-hosted runners!
# Trigger the workflow by cron. The default time zone of GitHub Actions is UTC.
schedule:
- cron: '0 14 1-31/2 * *'
# Trigger the workflow manually
workflow_dispatch:
inputs:
git-ref:
description: Git Ref (Optional)
required: false
random-seed:
description: Random Seed (Optional)
required: false
dimension:
description: Dimension (Optional)
required: false
depth:
description: Depth of recursion (Optional)
required: false
# Show the git ref in the workflow name if it is invoked manually.
run-name: ${{ github.event_name == 'workflow_dispatch' && format('Manual run {0} , seed {1}, dimension {2}, recursion depth {3}', inputs.git-ref, inputs.random-seed, inputs.dimension, inputs.depth) || '' }}
jobs:
test:
name: Recursive test of PRIMA
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
# The matrix is the same as that of stress_test_matlab.yml, except for test
matrix:
os: [ubuntu-latest, macos-15-intel, windows-latest]
matlab: [R2023a, latest]
solver: [uobyqa, newuoa, bobyqa, lincoa, cobyla]
use_system_libgcc: [true] # Whether to use the system libgcc or the one shipped with MATLAB.
steps:
- name: Set http.postBuffer and core.compression
# This is a workaround for random "early EOF" of checkout.
# See https://github.com/actions/checkout/issues/748, https://github.com/actions/checkout/issues/1379
if: startsWith(matrix.os, 'windows')
run: git config --global http.postBuffer 1048576000 && git config --global core.compression 0
- name: Run `sudo apt update`
if: startsWith(matrix.os, 'ubuntu')
run: sudo apt update || true # Otherwise, free-disk-space or other actions relying on `apt` may fail
- name: Free disk space
uses: jlumbroso/free-disk-space@main
if: startsWith(matrix.os, 'ubuntu')
with:
# all of these default to true, but feel free to set to "false" if necessary for your workflow
android: true
dotnet: true
haskell: true
large-packages: true
docker-images: true
swap-storage: false # Important, or the runner may be shut down due to memory starvation.
- name: Clone Repository (Latest)
uses: actions/checkout@v6.0.2
if: github.event.inputs.git-ref == ''
with:
submodules: recursive
# ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
# As of 231227, checkout with ssh fails frequently on Windows runners.
- name: Clone Repository (Custom Ref)
uses: actions/checkout@v6.0.2
if: github.event.inputs.git-ref != ''
with:
ref: ${{ github.event.inputs.git-ref }}
submodules: recursive
# ssh-key: ${{ secrets.SSH_PRIVATE_KEY_ACT }} # This forces checkout to use SSH, not HTTPS
# As of 231227, checkout with ssh fails frequently on Windows runners.
- name: Miscellaneous setup
run: bash .github/scripts/misc_setup
- name: Set up gfortran on Linux
if: startsWith(matrix.os, 'ubuntu')
uses: fortran-lang/setup-fortran@main
with:
compiler: gcc
version: latest
- name: Check gfortran version on Linux
if: startsWith(matrix.os, 'ubuntu')
run: which gcc && gcc --version && which gfortran && gfortran --version
- name: Decide the version of oneAPI to use on macOS and Windows
shell: bash
if: ${{ startsWith(matrix.os, 'macos') || startsWith(matrix.os, 'windows') }}
run: |
# Initialize ONEAPI_VERSION to "latest", causing the installer script to install the latest oneAPI.
ONEAPI_VERSION="latest"
# On Windows. the latest oneAPI supported by MATLAB R2023a/b and R2024a/b is 2023 and 2024,
# respectively. Thus we set ONEAPI_VERSION to the following. If matrix.matlab is "latest",
# then ONEAPI_VERSION will be "latest".
if [[ "${{ matrix.os }}" == windows* ]]; then
ONEAPI_VERSION=$(echo "${{ matrix.matlab }}" | sed -e 's/R\([0-9]*\)\([ab]\)/\1/')
fi
echo "ONEAPI_VERSION=$ONEAPI_VERSION" >> $GITHUB_ENV
echo "ONEAPI_VERSION:" $ONEAPI_VERSION
- name: Install Intel oneAPI on macOS
if: startsWith(matrix.os, 'macos')
run: bash .github/scripts/install_oneapi_macos.sh $ONEAPI_VERSION
- name: Install Intel oneAPI on Windows
if: startsWith(matrix.os, 'windows')
run: cmd.exe "/K" '".github\scripts\install_oneapi_windows.bat %ONEAPI_VERSION%"'
- name: Set up MATLAB with optimization toolbox
uses: matlab-actions/setup-matlab@v2.6.1
with:
release: ${{ matrix.matlab }}
cache: true
products: Optimization_Toolbox Parallel_Computing_Toolbox
- name: Link system libgcc to MATLAB if needed
if: startsWith(matrix.os, 'ubuntu')
shell: bash
run: |
matlab_root=$(realpath $(dirname $(which matlab))/../)
echo "MATLAB root is ${matlab_root}"
matlab_libgcc="${matlab_root}/sys/os/glnxa64/libgcc_s.so.1"
echo "MATLAB libgcc is:"
ls -alh ${matlab_libgcc} || exit 42
echo "gcc strings in MATLAB libgcc are:"
strings ${matlab_libgcc} | grep -iE "^GCC_"
echo "latest gcc version string in MATLAB libgcc is:"
readelf -V ${matlab_libgcc} | grep -oiE 'GCC_([0-9]+)(.[0-9]+){0,2}' | sort -V | tail -1
system_libgcc="/usr/lib/x86_64-linux-gnu/libgcc_s.so.1"
echo "System libgcc is:"
ls -alh ${system_libgcc} || exit 42
echo "gcc strings in system libgcc are:"
strings ${system_libgcc} | grep -iE "^GCC_"
echo "latest gcc version string in system libgcc is:"
readelf -V ${system_libgcc} | grep -oiE 'GCC_([0-9]+)(.[0-9]+){0,2}' | sort -V | tail -1
if [[ "${{ matrix.use_system_libgcc }}" == "true" ]] ; then
ln -sf ${system_libgcc} ${matlab_libgcc} || exit 42
echo "Linked ${system_libgcc} to ${matlab_libgcc}."
else
echo "Keep ${matlab_libgcc} untouched."
fi
echo "After the operation, MATLAB libgcc is:"
ls -alh ${matlab_libgcc} || exit 42
echo "gcc strings in MATLAB libgcc are:"
strings ${matlab_libgcc} | grep -iE "^GCC_"
echo "latest gcc version string in MATLAB libgcc is:"
readelf -V ${matlab_libgcc} | grep -oiE 'GCC_([0-9]+)(.[0-9]+){0,2}' | sort -V | tail -1
- name: Revise getMexLibgcc and compiled.m to print necessary information
shell: bash
run: |
cd matlab/setup_tools || exit 42
$SEDI 's|\(.*lddOut.*\);|\1|' getMexLibgcc.m
$SEDI 's|\(.*Path.*\);|\1|' getMexLibgcc.m
$SEDI 's|\(.*String.*\);|\1|' getMexLibgcc.m
$SEDI 's|\(.*Version.*\);|\1|' getMexLibgcc.m
cat getMexLibgcc.m
$SEDI 's|\(common_mex_options\s*=\s*.*$\)$|\1\ncommon_mex_options{:}|' compile.m
$SEDI 's|\(.*\s*=\s*getMexLibgcc().gccVersion.*\)|\1\ngetMexLibgcc() |' compile.m
$SEDI 's|\(.*_version\s*=\s*.*\);|\1 |' compile.m
$SEDI 's|\(compiler_options\s*=\s*.*\);|\1 |' compile.m
$SEDI "s|\(if\s*~support_internal_procedures\)|verLessThan('matlab', '25.1'), verLessThan('matlab', '25.2'), compiler_manufacturer, compiler_options, support_internal_procedures\n\1|" compile.m
cat compile.m
- name: Conduct the test
uses: matlab-actions/run-command@v2.4.0
with:
command: |
ver;
root_dir = pwd();
cd(fullfile(root_dir, 'matlab/tests'));
options = struct();
if ~isempty('${{ inputs.random-seed }}')
options.seed = str2num('${{ inputs.random-seed }}');
end
if ~isempty('${{ inputs.dimension }}')
options.n = str2num('${{ inputs.dimension }}');
end
if ~isempty('${{ inputs.depth }}')
options.depth = str2num('${{ inputs.depth }}');
end
options
% Conduct the test multiple times, in case some errors occur not during the first time but later.
try
recursive('${{ matrix.solver }}', options);
options.compile = false;
% Test parallel invocation of the solvers
parfor i = 1 : 2
recursive('${{ matrix.solver }}', options);
end
catch exception
% Copy the crash dump files to root_dir if exceptions occur.
copy_crash_dump_files(root_dir, true)
dir(root_dir)
rethrow(exception);
end
- name: Store artifacts
uses: actions/upload-artifact@v7
if: always() # Always run even if the workflow is canceled manually or due to overtime.
with:
name: ${{ matrix.solver }}
path: |
matlab_crash_dump*