multiqc tmpdir

Author: saulpierotti

conf/modules.config

@@ -938,6 +938,11 @@ process {
     withName: MULTIQC {
         conda = null // temporary for mOTUs 4
         ext.args   = { params.multiqc_title ? "--title \"${params.multiqc_title}\"" : '' }
+        memory = { 10.GB * task.attempt }
+        env = {
+            // multiqc writes large logs to local scratch, use the workdir instead
+            TMPDIR = { task.workDir }
+        }
         publishDir = [
             path: { "${params.outdir}/multiqc" },
             mode: params.publish_dir_mode,