EEGlabBugs.txt

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spectopo
line 731 should be 
 [compeegspecdB freqs] = spectcomp( newweights*data(:,:), frames, srate, epoch_subset, g);
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Signalstat
line 421 should be
topoplot(map,chan_locs,'electrodes','off','plotchans',1:length(map));
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pop_readegi
lines 223 > should be out-commeted
% if all(EEG.data(end,1:10) == 0)
%     disp('Deleting empty data reference channel (reference channel location is retained)');
%     EEG.data(end,:)   = [];
%     EEG.nbchan        = size(EEG.data,1);
%     EEG = eeg_checkset(EEG);
% end;
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Remember to replace channel location files!!

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topoplot
line 1374-1375 should be (to avoid nose and ears to disappear when plotting)
set(gca, 'xlim', [-0.6 0.6]); set(plotax, 'xlim', [-0.6 0.6]);
set(gca, 'ylim', [-0.6 0.6]); set(plotax, 'ylim', [-0.6 0.6]);
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pop_loadbv
line 287 (reading of markers) should be:
MRK = readbvconf(path, [ hdrfile(1:end-5) '.vmrk']);
line 152 (reading of Data) should be:
   [IN, message] = fopen(fullfile(path, ([hdrfile(1:end-5) '.dat'])));
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readegilocs.m
line 79 to 80 (which deletes the first 3 channels in locs structure) should be deleted.
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in topoplot.m
line 1337: the following line, should not be out-commented
%ringh= patch(headx,heady,ones(size(headx)),HEADCOLOR,'edgecolor',HEADCOLOR,'linewidth', HLINEWIDTH); hold on
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Fix contour function bug:
    %workaround conture function bug (Matlab R2014b)
    ind=isnan(ZiC);
    F=scatteredInterpolant(Xi(~ind),Yi(~ind),ZiC(~ind));
    ZiC(ind)=F(Xi(ind),Yi(ind));
    %workaround end

See https://github.com/NeurophysiologicalBiomarkerToolbox/NBT/commit/13d67549fda123dfec5d8e406d16fe9cf54a44a7

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eeg_eegrej : combine regions should be
function newregions = combineregions(regions)
newregions = combine(combine(regions));
    function newregions=combine(regions)
        [regions(:,1),ii]=sort(regions(:,1));
        regions(:,2) = regions(ii,2);
        newindex = 0;
        regions = [regions(1,:); regions];
        index = size(regions,1);
        while index >= 2
            if regions(index-1,2) >= regions(index,1)
                indexEnd = index;
                while regions(index-1,2) >= regions(index,1) && index > 2 %find nested regions
                    index = index - 1;
                end
                index =  index - 1;
                
                disp('Warning: overlapping regions detected and fixed in eeg_eegrej');
                newindex = newindex + 1;
                RegionEnd = max(regions(index+1:indexEnd,2));
                newregions(newindex,:) = [regions(index+1,1) RegionEnd(1)];
            else
                newindex = newindex + 1;
                newregions(newindex,:) = regions(index,:);
                index = index - 1;
            end
        end
        
        [newregions(:,1),ii]=sort(newregions(:,1));
        newregions(:,2) = newregions(ii,2);
    end
end