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10x Genomics

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https://10xgenomics.com
opensource@10xgenomics.com

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cellranger cellranger Public

10x Genomics Single Cell Analysis

Rust 414 97
loupeR loupeR Public

Convert Seurat objects to 10x Genomics Loupe files.

R 123 17
spaceranger spaceranger Public

Rust 7 1

Repositories

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Showing 10 of 71 repositories

analysis_guides Public
10x Genomics analysis guides files

10XGenomics/analysis_guides’s past year of commit activity

Jupyter Notebook 11 9 1 0 Updated Jun 9, 2025
orbit Public
Rust wrapper for STAR aligner

10XGenomics/orbit’s past year of commit activity

C 17 MIT 3 0 4 Updated Jun 9, 2025
HumanColonCancer_VisiumHD Public
Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

10XGenomics/HumanColonCancer_VisiumHD’s past year of commit activity

R 72 8 2 0 Updated Jun 9, 2025
intel-mkl-src Public Forked from rust-math/intel-mkl-src
Redistribute Intel MKL as a crate

10XGenomics/intel-mkl-src’s past year of commit activity

Rust 1 25 0 3 Updated Jun 9, 2025
rust-shardio Public
Out-of-memory sorting of large datasets map / reduce style processing

10XGenomics/rust-shardio’s past year of commit activity

Rust 47 MIT 4 3 3 Updated Jun 2, 2025
rust-bwa Public
Rust wrapper of the BWA C API

10XGenomics/rust-bwa’s past year of commit activity

Rust 18 MIT 10 2 0 Updated May 23, 2025
loupeR Public
Convert Seurat objects to 10x Genomics Loupe files.

10XGenomics/loupeR’s past year of commit activity

R 123 17 2 1 Updated May 19, 2025
spaceranger Public

10XGenomics/spaceranger’s past year of commit activity

Rust 7 1 1 2 Updated May 9, 2025
image-analysis-rs Public

10XGenomics/image-analysis-rs’s past year of commit activity

Rust 0 0 0 2 Updated May 9, 2025
rules_conda Public
Bazel rules for creating conda environments

10XGenomics/rules_conda’s past year of commit activity

Go 5 MIT 1 3 2 Updated May 5, 2025

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