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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 408 97

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 122 16

  3. spaceranger spaceranger Public

    Rust 7 1

Repositories

Showing 10 of 71 repositories
  • loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    10XGenomics/loupeR’s past year of commit activity
    R 122 16 2 1 Updated May 19, 2025
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 17 MIT 3 0 4 Updated May 19, 2025
  • intel-mkl-src Public Forked from rust-math/intel-mkl-src

    Redistribute Intel MKL as a crate

    10XGenomics/intel-mkl-src’s past year of commit activity
    Rust 1 24 0 2 Updated May 19, 2025
  • analysis_guides Public

    10x Genomics analysis guides files

    10XGenomics/analysis_guides’s past year of commit activity
    Jupyter Notebook 10 9 1 1 Updated May 16, 2025
  • spaceranger Public
    10XGenomics/spaceranger’s past year of commit activity
    Rust 7 1 1 2 Updated May 9, 2025
  • image-analysis-rs Public
    10XGenomics/image-analysis-rs’s past year of commit activity
    Rust 0 0 0 2 Updated May 9, 2025
  • rules_conda Public

    Bazel rules for creating conda environments

    10XGenomics/rules_conda’s past year of commit activity
    Go 5 MIT 1 3 2 Updated May 5, 2025
  • HumanColonCancer_VisiumHD Public

    Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

    10XGenomics/HumanColonCancer_VisiumHD’s past year of commit activity
    R 65 5 1 0 Updated Apr 29, 2025
  • zarr Public Forked from preyasshah/zarr

    Rust implementation of the Zarr N-dimensional array format.

    10XGenomics/zarr’s past year of commit activity
    Rust 1 Apache-2.0 5 0 1 Updated Apr 8, 2025
  • bamtofastq Public

    Convert 10x BAM files to the original FASTQs compatible with 10x pipelines

    10XGenomics/bamtofastq’s past year of commit activity
    Rust 63 MIT 7 17 13 Updated Mar 25, 2025
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