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Installation issue -- unable to find lzma.h error when compiling htslib

Status: Open.

#58 In ANGSD/NgsRelate;

· jphruska opened on Aug 16, 2025

Online help is not the same as the print out on terminal for version 23

Status: Open.

#52 In ANGSD/NgsRelate;

· deborahmleigh opened on Dec 5, 2023

Something wrong with freq

Status: Open.

#49 In ANGSD/NgsRelate;

· EmmaLouMc opened on May 4, 2023

Issue with glf file - too many sites

Status: Open.

#47 In ANGSD/NgsRelate;

· dgallery opened on Feb 16, 2023

Interpreting the inbreeding only Output.

Status: Open.

#46 In ANGSD/NgsRelate;

· john-proefrock opened on Feb 9, 2023

rmTrans option

Status: Open.

#33 In ANGSD/NgsRelate;

· nwales opened on Jul 6, 2020

verbose output

Status: Open.

#32 In ANGSD/NgsRelate;

· nwales opened on Jul 4, 2020

correct inbreeding and relatedness estimate using fst

Status: Open.

#21 In ANGSD/NgsRelate;

· ANGSD opened on Oct 28, 2019

use SM tag if using vcf/bcf

Status: Open.

#17 In ANGSD/NgsRelate;

· ANGSD opened on Feb 6, 2019

output progress with many threads

Status: Open.

#13 In ANGSD/NgsRelate;

· ANGSD opened on Jan 29, 2019