[pre-commit.ci] pre-commit autoupdate #279
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python | |
| name: Pytest | |
| on: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' # caching pip dependencies | |
| - uses: awalsh128/cache-apt-pkgs-action@latest | |
| with: | |
| packages: gfortran wget bzip2 libx11-6 csh | |
| version: 1.0 | |
| - name: A Hack for fortran | |
| run: | | |
| echo "Downloading gcc-6-base" | |
| wget http://archive.ubuntu.com/ubuntu/pool/universe/g/gcc-6/gcc-6-base_6.4.0-17ubuntu1_amd64.deb | |
| echo "Downloading libgfortran3" | |
| wget "http://archive.ubuntu.com/ubuntu/pool/universe/g/gcc-6/libgfortran3_6.4.0-17ubuntu1_amd64.deb" | |
| echo "Installing gcc-6-base" | |
| sudo dpkg -i gcc-6-base_6.4.0-17ubuntu1_amd64.deb | |
| echo "Installing libgfortran3" | |
| sudo dpkg -i libgfortran3_6.4.0-17ubuntu1_amd64.deb | |
| - name: Install dependencies | |
| run: | | |
| python3 -m pip install --upgrade pip | |
| python3 -m pip install pytest pytest-cov numpy git+https://github.com/radio-astro-tools/spectral-cube.git | |
| python3 -m pip install -U . | |
| - name: Install miriad | |
| run: | | |
| cd /opt | |
| echo "Downloading miriad" | |
| wget ftp://ftp.atnf.csiro.au/pub/software/miriad/miriad-common.tar.bz2 ftp://ftp.atnf.csiro.au/pub/software/miriad/miriad-linux64.tar.bz2 | |
| echo "Installing miriad" | |
| tar xvf miriad-common.tar.bz2 | |
| tar xvf miriad-linux64.tar.bz2 | |
| rm -rf *tar.bz2 | |
| cd /opt/miriad | |
| sed -e "s,@MIRROOT@,/opt/miriad," scripts/MIRRC.sh.in > MIRRC.sh | |
| chmod 644 MIRRC.sh | |
| echo source /opt/miriad/MIRRC.sh >> $HOME/.bashrc | |
| echo export PATH=${MIRBIN}:${PATH} >> $HOME/.bashrc | |
| source $HOME/.bashrc | |
| echo "/opt/miriad/linux64/bin" >> $GITHUB_PATH | |
| echo Installed miriad | |
| echo Testing installation | |
| echo GITHUB_PATH=$GITHUB_PATH | |
| ls -lh /opt/miriad/ | |
| - name: Test with pytest | |
| run: | | |
| pytest --cov=racs_tools |