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Fixup typos.
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descriptions/Zeng_Aging_Mouse_10Xv3.md

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Data is being share under the CC BY NC 4.0 license.
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Related resources :
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* 847 clusters and map into Whole Mouse Brain Taxonomy [Zeng Aging Mouse Taxonomy](Zeng_Aging_Mouse_taxonomy))
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* 847 clusters that are mappped into Whole Mouse Brain Taxonomy [Zeng Aging Mouse Taxonomy](Zeng_Aging_Mouse_taxonomy))
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Associated notebooks:
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* [**Getting started**](../notebooks/getting_started.ipynb): Learn how to use

descriptions/Zeng_Aging_Mouse_dataset.md

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* 1.2 million single cell transcriptomes of adult and aged mouse cells
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across select regions of the brain ([Zeng Aging Mouse 10Xv3](Zeng_Aging_Mouse_10Xv3.md))
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* 847 cluster taxonomy of cell with identified associations into the supertype
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* 847 cluster taxonomy of cells with identified associations into the supertype
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and above levels of the Whole Mouse Brain taxonomy.
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([Zeng Aging Mouse Taxonomy](Zeng_Aging_Mouse_taxonomy.md))

descriptions/Zeng_Aging_Mouse_taxonomy.md

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de novo clustering of all cells results in 847 cell clusters and reveals at
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least 14 age-biased clusters that are mostly glial types. Clusters in the study
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were mapped to the Whole Mouse Brain taxonomy ([WMB-taxonomy](WMB-taxonomy.md))
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to provided class, subclass and supertype annotations. At the broader cell
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to provide class, subclass and supertype annotations. At the broader cell
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subclass and supertype levels, age-associated gene expression signatures were
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analyzed resulting in a list of 2,449 differentially expressed genes (age-DE
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genes) for many neuronal and non-neuronal cell types.

notebooks/Zeng_Aging_Mouse_10x_snRNASeq_tutorial.ipynb

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"source": [
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"# Mouse Aging 10X RNA-seq gene expression \n",
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"\n",
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"In this notebook we'll explore some gene expressions and combine them with the cell metadata we showed in the clustering analysis tutorial.\n",
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"In this notebook we'll explore some gene expressions and combine them with the cell metadata we showed in the previous [clustering analysis tutorial](https://alleninstitute.github.io/abc_atlas_access/notebooks/Zeng_Aging_Mouse_clustering_analysis_and_annotation.html).\n",
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"\n",
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"You need to be either connected to the internet or connected to a cache that has the aging data downloaded already and have already downloaded the example data via the getting started notebook to run this notebook. "
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]

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