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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 359 153

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 24 14

Repositories

Showing 10 of 427 repositories
  • axonal_connectomics Public

    Repository for tools developed for axonal connectomics

    AllenInstitute/axonal_connectomics’s past year of commit activity
    Jupyter Notebook 2 1 3 3 Updated May 17, 2025
  • standard_morph Public
    AllenInstitute/standard_morph’s past year of commit activity
    Python 0 0 1 0 Updated May 16, 2025
  • EducationAndEngagement Public
    AllenInstitute/EducationAndEngagement’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated May 16, 2025
  • HeavyRNN_public Public
    AllenInstitute/HeavyRNN_public’s past year of commit activity
    Python 0 0 0 0 Updated May 16, 2025
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis’s past year of commit activity
    TypeScript 5 BSD-3-Clause 1 9 5 Updated May 16, 2025
  • Bulk-RNA-Snakeline Public
    AllenInstitute/Bulk-RNA-Snakeline’s past year of commit activity
    Python 0 0 0 0 Updated May 16, 2025
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 10 BSD-3-Clause 3 66 3 Updated May 15, 2025
  • sciduck Public
    AllenInstitute/sciduck’s past year of commit activity
    Jupyter Notebook 1 4 5 1 Updated May 15, 2025
  • abc_atlas_access Public

    Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

    AllenInstitute/abc_atlas_access’s past year of commit activity
    Jupyter Notebook 70 27 16 5 Updated May 15, 2025
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 26 5 4 2 Updated May 15, 2025
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