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lines changed Original file line number Diff line number Diff line change 5656 - name : Printing environment
5757 run : pip freeze
5858
59+ - name : Testing Embargoed Notebooks
60+ run : |
61+ pytest --nbmake --nbmake-timeout=8000 -n=auto "./docs/embargoed"
62+ rm ./docs/embargoed/*.nwb
63+
5964 - name : Testing Basics Notebooks
6065 run : |
6166 pytest --nbmake --nbmake-timeout=100000 -n=auto "./docs/basics"
8186 pytest --nbmake --nbmake-timeout=8000 -n=auto "./docs/projects"
8287 rm ./docs/projects/*.nwb
8388
84- - name : Testing Embargoed Notebooks
85- run : |
86- pytest --nbmake --nbmake-timeout=8000 -n=auto "./docs/embargoed"
87- rm ./docs/embargoed/*.nwb
88-
8989 - name : Printing log
9090 run : |
9191 git config --global --add safe.directory /__w/openscope_databook/openscope_databook
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Original file line number Diff line number Diff line change @@ -14,16 +14,16 @@ mpl-interactions==0.22.0
1414nbmake == 1.5.3
1515neo == 0.13.0
1616numcodecs == 0.11.0
17- numpy == 1.26.2
17+ numpy == 1.24.3
1818nwbwidgets
19- ophys-nway-matching @ git+https://github.com/AllenInstitute/ophys_nway_matching@545504ab55922717ab623f8ede2c521a60aa1458
19+ ophys-nway-matching @ git+https://github.com/AllenInstitute/ophys_nway_matching.git
2020pandas == 1.5.2
2121Pillow == 11
2222pynwb == 2.6.0
2323pytest-xdist == 3.5.0
2424quantities == 0.14.1
2525remfile == 0.1.10
26- scikit-image == 0.24
26+ scikit-image == 0.18.3
2727scipy == 1.13.1
2828# ssm @ git+https://github.com/lindermanlab/ssm
2929statsmodels == 0.14.0
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