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don't git clone in docker to get files (then it will run older notebooks (from main) in the github workflows and not from the branch being tested
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@@ -7,8 +7,11 @@ RUN apt-get install -y libglib2.0-0
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RUN apt-get install -y python3 python3-pip
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RUN apt-get install -y git
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# clone databook files
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RUN git clone https://github.com/AllenInstitute/openscope_databook.git
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# copy databook files
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COPY requirements.txt ./openscope_databook/requirements.txt
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COPY setup.py ./openscope_databook/setup.py
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COPY README.md ./openscope_databook/README.md
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COPY LICENSE.txt ./openscope_databook/LICENSE.txt
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# for reasons I don't understand, these must be installed before the rest the requirements
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RUN pip install numpy cython

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