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Update ip_image_info: Bump bftools to 8.0.0 #224

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Merged
kostrykin merged 2 commits into from
Apr 10, 2026
Merged

Update ip_image_info: Bump bftools to 8.0.0 #224

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ac224e8
Bump bftools to 8.0.0
kostrykin Apr 10, 2026
8267a36
Remove `tif` and `csv` from input formats
kostrykin Apr 10, 2026
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17 changes: 9 additions & 8 deletions tools/image_info/image_info.xml
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Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
<tool id="ip_imageinfo" name="Show image info" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.0">
<description>with Bioformats</description>
<macros>
<token name="@TOOL_VERSION@">5.7.1</token>
<token name="@VERSION_SUFFIX@">1</token>
<token name="@TOOL_VERSION@">8.0.0</token>
<token name="@VERSION_SUFFIX@">0</token>
</macros>
<edam_operations>
<edam_operation>operation_3443</edam_operation>
Expand All @@ -13,13 +13,14 @@
<requirements>
<requirement type="package" version="@TOOL_VERSION@">bftools</requirement>
</requirements>
<command>
<![CDATA[
showinf '$input_file' -no-upgrade -minmax -nopix > '$output'
]]>
</command>
<command><![CDATA[

ln -s '$input_file' input.$input_file.ext &&
showinf input.$input_file.ext -no-upgrade -minmax -nopix > '$output'

]]></command>
<inputs>
<param label="Input Image" name="input_file" type="data" format="scn,ndpi,tf8,vms,xml,pcx,binary,hdr,mov,psd,pbm,nrrd,tiff,pgm,ppm,txt,tf2,zip,top,gif,wav,bmp,png,gz,cif,fli,btf,jpg,avi,html,sif,tif,csv,ome.tiff,par,fits,jp2,eps,nhdr,svs,mrc"/>
<param label="Input Image" name="input_file" type="data" format="scn,ndpi,tf8,vms,xml,pcx,binary,hdr,mov,psd,pbm,nrrd,tiff,pgm,ppm,txt,tf2,zip,top,gif,wav,bmp,png,gz,cif,fli,btf,jpg,avi,html,sif,ome.tiff,par,fits,jp2,eps,nhdr,svs,mrc"/>
</inputs>
<outputs>
<data format="txt" name="output"/>
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