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Examples of RiPP families that can be implemented
Friederike Biermann edited this page Jun 20, 2024
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| RiPP family | Example | Tailoring reactions | Citation |
|---|---|---|---|
| Amatoxins | α-Amanitin | HYDROXYLATION, OXIDATIVE_BOND_FORMATION | 10.1016/j.fgb.2011.12.005 |
| Autoinducing peptides | AIP-I | 10.1073/pnas.92.26.12055 | |
| Atropopeptides | Amyxirubin A | DOUBLE_BOND_REDUCTION, OXIDATIVE_BOND_FORMATION | 10.1002/anie.202208361 |
| Baterial head-to-tail cyclized peptides | Enterocin AS-48 | 10.1016/0014-5793(94)00925-2 | |
| Biarylitides | Biarylitide YYH | OXIDATIVE_BOND_FORMATION | 10.1016/j.chembiol.2020.11.009 |
| Borosins | Omphalotin | N_METHYLTRANSFERASE | 10.1002/anie.201703488 |
| Cihunamides | Cihunamide A | OXIDATIVE_BOND_FORMATION | 10.1002/anie.202300998 |
| Cyanobactins | Trunkamide | CYCLODEHYDRATION, PRENYLTRANSFERASE | 10.1021/jo9914566 |
| Cyclotides | Kalata B1 | OXIDATIVE_BOND_FORMATION | 10.1002/pro.5560031022 |
| Dikaritins | Ustiloxin B | ACYLTRANSFERASE, HYDROXYLATION, METHYLTRANSFERASE, OXIDATIVE_BOND_FORMATION | 10.1016/j.fgb.2014.04.011 |
| Lanthipeptide Class I | Nisin | THREONINE_SERINE_DEHYDRATASE, LANTHIPEPTIDE_CYCLASE | 10.1128/jb.16.5.321-325.1928 |
| Lanthipeptide Class II | Cytolysin | THREONINE_SERINE_DEHYDRATASE, LANTHIPEPTIDE_CYCLASE | 10.1128/jb.176.23.7335-7344.1994 |
| Lanthipeptide Class III | Labyrinthopeptin | LANTHIONINE_SYNTHETASE | 10.1002/anie.200905773 |
| LAP (linear azoline containing peptides) | Microcin B17 , Bottromycin | CYCLODEHYDRATION, MACROLACTAMIDINATION | 10.1126/science.274.5290.1188 10.1039/npr.D0NP00097C |
| Lassopeptides | Streptomonomicin | PROTEASE, MACROLACTAM_SYNTHASE | 10.1016/j.chembiol.2014.11.017 |
| Microviridins | Microviridin B | ACETYL_TRANSFERASE | 10.1002/anie.200802730 |
| Orbitides | Segetalin A | 10.1074/jbc.M112.437947 | |
| Phallotoxins | Phalloidin | OXIDATIVE_BOND_FORMATION, HYDROXYLATION | 10.1002/jlac.199119910132 |
| Plesiocins | Plesiocin | 10.1021/acs.biochem.9b00803 | |
| Proteusins | Polytheonamide A | C_METHYLTRANSFERASE, N_METHYLTRANSFERASE, AMINO_ACID_EPIMERASE, DEHYDRATASE, HYDROXYLATION, MONOAMINE_OXIDASE, DOUBLE_BOND_SHIFT (ARGINASE) | 10.1038/nchem.2666 |
| Ranthipeptides | Freyrasin | OXIDATIVE_DOUBLE_BOND_FORMATION | 10.1021/jacs.9b01519 |
| Sactipeptides | Thurincin H | OXIDATIVE_DOUBLE_BOND_FORMATION | 10.1002/anie.201102527 |
| Spliceotides | No congener characterized | SPLICEASE | 10.1016/j.chempr.2022.09.017 |
| Streptides | Streptide | OXIDATIVE_BOND_FORMATION | 10.1021/jacs.8b10266 |
| Thiopeptides | Thiomuracin | THREONINE_SERINE_DEHYDRATASE, THIOPEPTIDE_CYCLASE, CYCLODEHYDRATION, METHYLTRANSFERASE, HYDROXYLATION, DOUBLE_BOND_FORMATION, EPOXIDATION, DEHYDRATION | 10.1021/ja900488a |
| Thiopeptides | Thiopeptin | THREONINE_SERINE_DEHYDRATASE, THIOPEPTIDE_CYCLASE, CYCLODEHYDRATION, METHYLTRANSFERASE, HYDROXYLATION, DOUBLE_BOND_FORMATION, EPOXIDATION, DEHYDRATION, THIOAMIDATION | 10.1021/ja900488a |
| Graspetides | Microviridin | OMEGA_THIOESTER, OMEGA_ESTER, OMEGA_AMIDE | 10.1016/j.trechm.2023.04.003 |