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28th INTERNATIONAL CONFERENCE ON MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION

MOTOR: Multimodal Optimal Transport via Grounded Retrieval in Medical Visual Question Answering

Mai A. Shaaban , Tausifa Jan Saleem , Vijay Ram Papineni , Mohammad Yaqub

Mohamed bin Zayed University of Artificial Intelligence, Abu Dhabi, UAE

Sheikh Shakhbout Medical City, Abu Dhabi, UAE

Email Static Badge python pytorch


MOTOR


💡 Highlights

  • A novel training-free approach for retrieving precise contexts in a medical multimodal retrieval-augmented generation framework.
  • A fine-grained visual-text alignment, which captures the underlying structures between the query and the retrieved elements, thereby improving clinical relevance.
  • Automated and human expert evaluations across vision language models and medical visual question answering datasets to demonstrate the strength of our proposed approach.

🔥 News

  • 2025/06/25: Code is released!
  • 2025/06/17: Paper is accepted at MICCAI 2025 - The best conference for medical image computing!

🛠️ Install

  • Clone this repository

    git clone https://github.com/Mai-CS/MOTOR.git
    cd MOTOR
  • Install dependencies: (we assume GPU device / cuda available):

    source install.sh

Now, you should be all set.

▶️ Usage

  • Generate grounded reports

    cd models/
    python caption_maira.py --dataset_name "med-diff-vqa"
  • Generate answers

    cd ..
    source run_MOTOR.sh

🧳 Models

✒️ Citation

@InProceedings{ShaMai_MOTOR_MICCAI2025,
        author = { Shaaban, Mai A. and Saleem, Tausifa Jan and Papineni, Vijay Ram Kumar and Yaqub, Mohammad},
        title = { { MOTOR: Multimodal Optimal Transport via Grounded Retrieval in Medical Visual Question Answering } },
        booktitle = {proceedings of Medical Image Computing and Computer Assisted Intervention -- MICCAI 2025},
        year = {2025},
        publisher = {Springer Nature Switzerland},
        volume = {LNCS 15965},
        month = {September},
        page = {467 -- 477}
}

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