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Tiling deskew #110

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Tiling deskew #110

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6ed6808
initialize
pr4deepr Apr 29, 2025
2220dda
determine max memory
pr4deepr Aug 12, 2025
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2 changes: 2 additions & 0 deletions core/lls_core/tiling.py
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Original file line number Diff line number Diff line change
@@ -0,0 +1,2 @@
#Functions for tiling.. Could move functions into utils.py as well
#PLACEHOLDER
16 changes: 15 additions & 1 deletion core/lls_core/utils.py
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Expand Up @@ -341,4 +341,18 @@ def convert_xyz_to_zyx_order(deskew_affine_transform:cle.AffineTransform3D):
# Swap X and Z axes using numpy indexing
xyz_to_zyx = [2, 1, 0, 3]
zyx_tranform = deskew_affine_transform[xyz_to_zyx][:, xyz_to_zyx]
return zyx_tranform
return zyx_tranform

def get_max_allocation_size():
"""Returns maximum memory size for OpenCL device
Returns:
int: Maximum allocation size for OpenCL device
"""
import re
info = cle.cl_info()
match = re.search(r'MAX_MEM_ALLOC_SIZE:(\d+)', info)
if match:
return int(match.group(1))
else:
logger.error("Could not find MAX_MEM_ALLOC_SIZE in OpenCL device info")
return None
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