Added elastix registration as an option
#114
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…and set output directory
…or parameter maps
…rs more effectively
…nd improve logging
…hen log file path is not provided
…ization and streamline matrix path handling
…ved log management
…g path and file name
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This is ready for review @MarcelRosier @neuronflow |
sarthakpati
changed the title
elastix registration as an option
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Left some minor comments in #119 , otherwise LGTM |
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I am addressing all comments in #119 directly. Putting this as draft (and it will most likely close itself out once the other PR gets merged). |
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Fixes #111