update runners (#968)

Author: O957

.github/workflows/cache-hubval-deps.yaml

@@ -10,7 +10,7 @@ on:
 jobs:
   build-deps-cache-on-main:
     if: ${{ github.repository_owner == 'CDCgov' }}
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
@@ -19,7 +19,7 @@ jobs:
 
       - uses: r-lib/actions/setup-r@v2
         with:
-          install-r: false
+          install-r: true
           use-public-rspm: true
           extra-repositories: 'https://hubverse-org.r-universe.dev'
 

.github/workflows/create-baseline.yaml

@@ -7,7 +7,7 @@ on:
 jobs:
   generate-baseline-forecasts:
     if: ${{ github.repository_owner == 'CDCgov' }}
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
@@ -24,7 +24,7 @@ jobs:
     - name: Setup R
       uses: r-lib/actions/setup-r@v2
       with:
-        install-r: false
+        install-r: true
         use-public-rspm: true
 
     - name: Install dependencies

.github/workflows/create-ensemble.yaml

@@ -10,7 +10,7 @@ permissions:
 jobs:
   generate-covidhub-ensemble:
     if: ${{ github.repository_owner == 'CDCgov' }}
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
@@ -24,7 +24,7 @@ jobs:
     - uses: actions/checkout@v4
     - uses: r-lib/actions/setup-r@v2
       with:
-        install-r: false
+        install-r: true
         use-public-rspm: true
 
     - name: Install system dependencies

.github/workflows/dispatch-covidhub-internal-reports.yaml

@@ -12,7 +12,7 @@ on:
 jobs:
   update-webpage-data:
     if: ${{ github.repository_owner == 'CDCgov' }}
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     steps:
       - name: Generate Installation Token
         id: generate_token

.github/workflows/dispatch-covidhub-reports.yaml

@@ -11,7 +11,7 @@ on:
 jobs:
   update-visualization-data:
     if: ${{ github.repository_owner == 'CDCgov' }}
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     steps:
       - name: Generate Installation Token
         id: get_token

.github/workflows/hubverse-aws-upload.yaml

@@ -18,7 +18,7 @@ jobs:
   upload:
     # Don't run on forked repositories
     if: github.event.repository.fork != true
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
 
     steps:
     - name: Checkout

.github/workflows/labeler.yaml

@@ -5,7 +5,7 @@ on:
 
 jobs:
   labeler:
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     permissions:
       contents: read
       pull-requests: write

.github/workflows/merge-pr.yaml

@@ -8,7 +8,7 @@ on:
 
 jobs:
   approve-and-merge-pr:
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     if: github.event.workflow_run.conclusion == 'success'
     permissions: 
       contents: write

.github/workflows/update-authorized-users.yaml

@@ -12,7 +12,7 @@ on:
 jobs:
   update-users-list:
     if: ${{ github.repository_owner == 'CDCgov' }}
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     steps:
     - name: Generate Installation Token
       id: get_token
@@ -27,7 +27,7 @@ jobs:
     - name: Setup R
       uses: r-lib/actions/setup-r@v2
       with:
-        install-r: false
+        install-r: true
         use-public-rspm: true
 
     - name: Install dependencies

.github/workflows/validate-config.yaml

@@ -15,7 +15,7 @@ permissions:
 
 jobs:
   validate-hub-config:
-    runs-on: ubuntu-22.04
+    runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
       PR_NUMBER: ${{ github.event.number }}
@@ -26,7 +26,7 @@ jobs:
 
       - uses: r-lib/actions/setup-r@v2
         with:
-          install-r: false
+          install-r: true
           use-public-rspm: true
           extra-repositories: 'https://hubverse-org.r-universe.dev'