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Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 20

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

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Repositories

Showing 10 of 442 repositories
  • NEDSS-DataReporting Public

    Data Near Real Time Reporting micro services for Modernized NBS System

    CDCgov/NEDSS-DataReporting’s past year of commit activity
    TSQL 0 Apache-2.0 3 0 12 Updated Mar 14, 2025
  • CDCgov/NEDSS-Modernization’s past year of commit activity
    Java 20 4 0 9 Updated Mar 14, 2025
  • RecordLinker Public

    The RecordLinker is a service that links records from two datasets based on a set of common attributes. The service is designed to be used in a variety of public health contexts, such as linking patient records from different sources or linking records from different public health surveillance systems.

    CDCgov/RecordLinker’s past year of commit activity
    Python 4 Apache-2.0 2 30 5 Updated Mar 14, 2025
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 69 Apache-2.0 27 13 1 Updated Mar 14, 2025
  • pyrenew-hew Public

    Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 8 Apache-2.0 3 66 3 Updated Mar 14, 2025
  • prime-simplereport-site Public

    Landing / marketing site for the SimpleReport application

    CDCgov/prime-simplereport-site’s past year of commit activity
    JavaScript 11 CC0-1.0 11 8 1 Updated Mar 14, 2025
  • forecasttools-py Public

    A Python package for common pre- and post-processing operations done by CFA Predict for short term forecasting, nowcasting, and scenario modeling.

    CDCgov/forecasttools-py’s past year of commit activity
    Python 7 Apache-2.0 2 17 4 Updated Mar 14, 2025
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 3 0 0 Updated Mar 13, 2025
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 7 7 0 0 Updated Mar 13, 2025
  • cdc-open-viz Public

    CDC OpenViz is a library of React packages for data visualization.

    CDCgov/cdc-open-viz’s past year of commit activity
    TypeScript 40 Apache-2.0 26 0 6 Updated Mar 13, 2025