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Turned off skip_on_ci() to see errors with GitHub Actions #27

Turned off skip_on_ci() to see errors with GitHub Actions

Turned off skip_on_ci() to see errors with GitHub Actions #27

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
name: R-CMD-check-macos.yaml
permissions: read-all
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'release'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- name: Install JAGS (macOS)
if: runner.os == 'macOS'
run: |
brew install jags
echo "JAGS_HOME=$(brew --prefix jags)" >> $GITHUB_ENV
- name: Set up JAGS environment
if: runner.os == 'macOS'
run: |
echo "JAGS_LIB=$JAGS_HOME/lib" >> $GITHUB_ENV
echo "PKG_CONFIG_PATH=$JAGS_HOME/lib/pkgconfig:$PKG_CONFIG_PATH" >> $GITHUB_ENV
echo "LDFLAGS=-L$JAGS_HOME/lib" >> $GITHUB_ENV
echo "CPPFLAGS=-I$JAGS_HOME/include" >> $GITHUB_ENV
echo "LD_LIBRARY_PATH=$JAGS_HOME/lib:$LD_LIBRARY_PATH" >> $GITHUB_ENV
echo "DYLD_LIBRARY_PATH=$JAGS_HOME/lib:$DYLD_LIBRARY_PATH" >> $GITHUB_ENV
# Create symbolic links for JAGS modules
sudo mkdir -p /usr/local/lib/JAGS/modules-4
for module in basemod bugs terminal; do
sudo ln -sf "$JAGS_HOME/lib/JAGS/modules-4/${module}.so" "/usr/local/lib/JAGS/modules-4/${module}.so"
done
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'