fix: bug in plot_cluster_centers() by removing theme_void()
#137
Workflow file for this run
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| name: test-coverage.yaml | |
| permissions: read-all | |
| jobs: | |
| test-coverage: | |
| runs-on: macOS-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - name: Install JAGS (macOS) | |
| run: | | |
| brew install jags | |
| echo "JAGS_HOME=$(brew --prefix jags)" >> $GITHUB_ENV | |
| - name: Set up JAGS environment | |
| run: | | |
| echo "JAGS_LIB=$JAGS_HOME/lib" >> $GITHUB_ENV | |
| echo "PKG_CONFIG_PATH=$JAGS_HOME/lib/pkgconfig:$PKG_CONFIG_PATH" >> $GITHUB_ENV | |
| echo "LDFLAGS=-L$JAGS_HOME/lib" >> $GITHUB_ENV | |
| echo "CPPFLAGS=-I$JAGS_HOME/include" >> $GITHUB_ENV | |
| echo "LD_LIBRARY_PATH=$JAGS_HOME/lib:$LD_LIBRARY_PATH" >> $GITHUB_ENV | |
| echo "DYLD_LIBRARY_PATH=$JAGS_HOME/lib:$DYLD_LIBRARY_PATH" >> $GITHUB_ENV | |
| # Create symbolic links for JAGS modules | |
| sudo mkdir -p /usr/local/lib/JAGS/modules-4 | |
| for module in basemod bugs terminal; do | |
| sudo ln -sf "$JAGS_HOME/lib/JAGS/modules-4/${module}.so" "/usr/local/lib/JAGS/modules-4/${module}.so" | |
| done | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::covr, any::xml2 | |
| needs: coverage | |
| - name: Test coverage | |
| run: | | |
| cov <- covr::package_coverage( | |
| quiet = FALSE, | |
| clean = FALSE, | |
| install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | |
| ) | |
| covr::to_cobertura(cov) | |
| shell: Rscript {0} | |
| - uses: codecov/codecov-action@v4 | |
| with: | |
| # Fail if error if not on PR, or if on PR and token is given | |
| fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }} | |
| file: ./cobertura.xml | |
| plugin: noop | |
| disable_search: true | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| - name: Show testthat output | |
| if: always() | |
| run: | | |
| ## -------------------------------------------------------------------- | |
| find "${{ runner.temp }}/package" -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Upload test results | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage-test-failures | |
| path: ${{ runner.temp }}/package |