feat(plots): changes plot_scores() to display frequencies not rates
#42
Workflow file for this run
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| name: R-CMD-check.yaml | |
| permissions: read-all | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel-1'} | |
| - {os: windows-latest, r: 'release'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install system dependencies (Ubuntu) | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libgsl-dev libgsl27 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: Install JAGS (macOS) | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install jags | |
| echo "JAGS_HOME=$(brew --prefix jags)" >> $GITHUB_ENV | |
| - name: Install JAGS (Windows) | |
| if: runner.os == 'Windows' | |
| run: | | |
| # Create a temporary directory for the installer | |
| $tempDir = Join-Path $env:RUNNER_TEMP "jags-installer" | |
| New-Item -ItemType Directory -Path $tempDir -Force | |
| # Download JAGS to the temporary directory | |
| $installerPath = Join-Path $tempDir "JAGS-4.3.1.exe" | |
| curl -LO https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Windows/JAGS-4.3.1.exe | |
| Move-Item -Path "JAGS-4.3.1.exe" -Destination $installerPath | |
| # Install JAGS | |
| Start-Process -FilePath $installerPath -ArgumentList "/S" -NoNewWindow -Wait | |
| # Set environment variable | |
| echo "JAGS_HOME=C:/Program Files/JAGS/JAGS-4.3.1" >> $env:GITHUB_ENV | |
| # Clean up the installer | |
| Remove-Item -Path $tempDir -Recurse -Force | |
| shell: pwsh | |
| - name: Set up JAGS environment (macOS) | |
| if: runner.os == 'macOS' | |
| run: | | |
| echo "JAGS_LIB=$JAGS_HOME/lib" >> $GITHUB_ENV | |
| echo "PKG_CONFIG_PATH=$JAGS_HOME/lib/pkgconfig:$PKG_CONFIG_PATH" >> $GITHUB_ENV | |
| echo "LDFLAGS=-L$JAGS_HOME/lib" >> $GITHUB_ENV | |
| echo "CPPFLAGS=-I$JAGS_HOME/include" >> $GITHUB_ENV | |
| echo "LD_LIBRARY_PATH=$JAGS_HOME/lib:$LD_LIBRARY_PATH" >> $GITHUB_ENV | |
| echo "DYLD_LIBRARY_PATH=$JAGS_HOME/lib:$DYLD_LIBRARY_PATH" >> $GITHUB_ENV | |
| # Create symbolic links for JAGS modules | |
| sudo mkdir -p /usr/local/lib/JAGS/modules-4 | |
| for module in basemod bugs terminal; do | |
| sudo ln -sf "$JAGS_HOME/lib/JAGS/modules-4/${module}.so" "/usr/local/lib/JAGS/modules-4/${module}.so" | |
| done | |
| - name: Set up JAGS environment (Windows) | |
| if: runner.os == 'Windows' | |
| run: | | |
| echo "PATH=C:/Program Files/JAGS/JAGS-4.3.1/bin;${env:PATH}" >> $env:GITHUB_ENV | |
| shell: pwsh | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |
| build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' |