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CU Anschutz BDC Github account

Hi 👋 thanks for visiting the BDC github account. This account is used by members of the Barbara Davis Diabetes Center at the University of Colorado Anschutz Medical Campus. This repository contains code associated with the papers published by faculy and trainees at the BDC. We also have general resources, like pipelines, tutorials, and packages that can be used by the greater community. All of the resources are under active development. Feel free to browse and reach out to Kristen (kristen.wells-wrasman [at] cuanschutz.edu) if you have any questions or concerns.

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  1. snakemake_pipelines snakemake_pipelines Public

    A collection of snakemake pipelines to analyze various data types. This is under active development.

    R 2 1

  2. scAnalysisR scAnalysisR Public

    A package to analyze single cell data in R. This package is under active development.

    R

Repositories

Showing 10 of 13 repositories
  • code_club_murder_mystery Public

    A series of coding exercises in solving common errors

    CUAnschutzBDC/code_club_murder_mystery’s past year of commit activity
    R 0 0 0 0 Updated Apr 24, 2025
  • slurm_snakemake Public

    Resources necessary to submit a snakejob on alpine

    CUAnschutzBDC/slurm_snakemake’s past year of commit activity
    R 1 0 0 0 Updated Apr 15, 2025
  • docker_singularity_recipes Public

    A collection of docker and singularity recipes for informatic analysis

    CUAnschutzBDC/docker_singularity_recipes’s past year of commit activity
    C 0 0 0 0 Updated Apr 8, 2025
  • smith_nicholas_sc_antigen Public

    Analysis of the antigen binding B cells

    CUAnschutzBDC/smith_nicholas_sc_antigen’s past year of commit activity
    C 0 MIT 0 3 0 Updated Jan 2, 2025
  • snakemake_pipelines Public

    A collection of snakemake pipelines to analyze various data types. This is under active development.

    CUAnschutzBDC/snakemake_pipelines’s past year of commit activity
    R 2 MIT 1 1 0 Updated Nov 12, 2024
  • scAnalysisR Public

    A package to analyze single cell data in R. This package is under active development.

    CUAnschutzBDC/scAnalysisR’s past year of commit activity
    R 0 MIT 0 0 0 Updated Sep 16, 2024
  • Tutorials Public

    Tutorials for the BDC

    CUAnschutzBDC/Tutorials’s past year of commit activity
    Shell 2 0 0 0 Updated Apr 15, 2024
  • alpine_guide Public

    A guide for using the alpine server at the University of Colorado

    CUAnschutzBDC/alpine_guide’s past year of commit activity
    Shell 3 0 0 0 Updated Mar 16, 2024
  • RBFOX2_project Public

    Analysis pipeline and original code for RBFOX2 project - RNA-Seq and eCLIP-Seq.

    CUAnschutzBDC/RBFOX2_project’s past year of commit activity
    R 1 1 1 0 Updated Sep 11, 2023
  • Smith_210825_b_cell_analysis Public

    Analysis of human B cells for Mia Smith, Catherine Nicolas, and Zach Stensland

    CUAnschutzBDC/Smith_210825_b_cell_analysis’s past year of commit activity
    R 0 MIT 0 0 0 Updated Apr 10, 2023

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