Update pde class to enable multiple inputs for the FEniCS PDE model #332
Workflow file for this run
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| name: pytest | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| workflow_dispatch: | |
| repository_dispatch: # Triggered when CUQIpy updates via PyPI (runs only on main branch). | |
| types: [run-tests-on-cuqipy-update] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| python-version: 3.8 | |
| miniforge-variant: Miniforge3 | |
| miniforge-version: latest | |
| - name: Conda info | |
| shell: bash -l {0} | |
| run: | | |
| conda info | |
| which python | |
| - name: Conda install FEniCS | |
| shell: bash -l {0} | |
| run: | | |
| conda config --set always_yes yes | |
| conda config --add channels conda-forge | |
| conda create -n fenicsproject -c conda-forge fenics | |
| conda activate fenicsproject | |
| which python | |
| python -c "from dolfin import *" | |
| - name: Install dependencies | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| python -m pip install --upgrade pip | |
| python -m pip install -r requirements.txt | |
| python -m pip install -r requirements-dev.txt | |
| - name: Install pre-release of CUQIpy # We install latest pre-release version of CUQIpy to catch upstream bugs early | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| python -m pip install cuqipy --pre --upgrade | |
| - name: Lint with flake8 | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| python -m pytest tests -vvv | |