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Wrap "" around ? in documentation

Status: Open.

#57 In DavidsonGroup/flexiplex;

· Shians opened on Jun 5, 2025

No output to stdout or txt file when running on trimmed fastq

Status: Open.

#56 In DavidsonGroup/flexiplex;

· Shians opened on Jun 5, 2025

uncaught exception of type std::out_of_range: basic_string

Status: Open.

#55 In DavidsonGroup/flexiplex;

· karolina16 opened on Jun 3, 2025

Extract reads where barcode was found in discovery mode

Status: Open.

#54 In DavidsonGroup/flexiplex;

· koehlek99 opened on Apr 25, 2025

Add ATAC barcode to defaults

enhancementNew feature or requestNew feature or request

Status: Open.

#49 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Nov 19, 2024

Best practice for pipelines

Status: Open.

#48 In DavidsonGroup/flexiplex;

· ljwharbers opened on Nov 19, 2024

Enable barcode and UMI length to be given, instead of a sequence of ?'s

low-prioritySlight quality of life changesSlight quality of life changes

Status: Open.

#32 In DavidsonGroup/flexiplex;

· olliecheng opened on Nov 27, 2023

Add option of reporting all read (not just hits), but appending barcodes to reads ID.

Status: Open.

#11 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Mar 16, 2023

Add option to report reads with no match

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Nov 10, 2022

Support for bams?

enhancementNew feature or requestNew feature or request

Status: Open.

#4 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Nov 10, 2022