v1.13.0

What's Changed

This minor release introduces new v3 atmospheric variable handlers, fixes several CMORization and dimension-handling bugs, and improves robustness by preserving legacy Xarray behavior. This release also drops Python 3.10 support and adds utilities for consistent NaN filling across variable handlers.

Enhancements

• Add new v3 atm var handlers by @chengzhuzhang in #307

Bug Fixes

• Fix areacello handler unlimited dimensions error by @chengzhuzhang in #319
• Replace np.nan with FILL_VALUE in clisccp.py for cmor.write by @TonyB9000 in #328
• Add fill_nan() and apply to clmodis.py and clisccp.py by @tomvothecoder in #330

Internal Changes

• Preserve legacy Xarray compat and join settings by @tomvothecoder in #322
• Preserve legacy Xarray data_vars settings by @tomvothecoder in #325

DevOps

• Drop Python 3.10 support by @tomvothecoder in #318

Full Changelog: v1.12.2...v1.13.0

v1.13.0rc3

What's Changed

Enhancements

• Add new v3 atm var handlers by @chengzhuzhang in #307

Bug Fixes

• Fix areacello handler unlimited dimensions error by @chengzhuzhang in #319
• Replace np.nan with FILL_VALUE in clisccp.py for cmor.write by @TonyB9000 in #328
• Add fill_nan() and apply to clmodis.py and clisccp.py by @tomvothecoder in #330

Internal Changes

• Preserve legacy Xarray compat and join settings by @tomvothecoder in #322
• Preserve legacy Xarray data_vars settings by @tomvothecoder in #325

DevOps

• Drop Python 3.10 support by @tomvothecoder in #318

Full Changelog: v1.12.2...v1.13.0rc3

v1.13.0rc2

What's Changed

Enhancements

• Add new v3 atm var handlers by @chengzhuzhang in #307

Bug Fixes

• Fix areacello handler unlimited dimensions error by @chengzhuzhang in #319
• Replace np.nan with FILL_VALUE in clisccp.py for cmor.write by @TonyB9000 in #328

Internal Changes

• Preserve legacy Xarray compat and join settings by @tomvothecoder in #322
• Preserve legacy Xarray data_vars settings by @tomvothecoder in #325

DevOps

• Drop Python 3.10 support by @tomvothecoder in #318

Full Changelog: v1.12.2...v1.13.0rc2

v1.13.0rc1

What's Changed

Enhancements

• Add new v3 atm var handlers by @chengzhuzhang in #307

Bug Fixes

• Fix areacello handler unlimited dimensions error by @chengzhuzhang in #319

DevOps

• Drop Python 3.10 support by @tomvothecoder in #318

Full Changelog: v1.12.2...v1.13.0rc1

v1.12.2

What's Changed

This patch release fixes a bug where resource contention can occur if multiple e3sm_to_cmip invocations write to the same CMIP metadata file. It ensures uniqueness of these files per process by appending a PID to the name.

Bug Fixes

• Ensure uniqueness for user_metadata.json by appending PID by @tomvothecoder in #314

Full Changelog: v1.12.1...v1.12.2

v1.12.1

What's Changed

This patch release fixes an issue where intermediate MPAS variables would save to a single, non-unique temporary directory. This can result in hanging when e3sm_to_cmip processes share the same output directory (and temp directory) on shared filesystems, specifically due to HDF5 filelocking. Now every e3sm_to_cmip process will its own unique temporary sub-directory, preventing collision and hanging.

Bug Fixes

• Make each MPAS temp directory unique under outpath_path by @tomvothecoder in #310

DevOps

• Remove unnecessary Python < 3.10 future and typing imports by @tomvothecoder in #312
• Bump to v1.12.1 by @tomvothecoder in #311

Full Changelog: v1.12.0...v1.12.1

v1.12.0

What's Changed

Enhancements

• Add 3D aerosol species mixing ratio by @mingxuanwupnnl in #262
• Centralize results directories and files and revamp logging by @tomvothecoder in #289
• Refactor entry point, optimize arg parsing, update dependencies by @tomvothecoder in #296
• Enhance logger readability to make debugging easier by @tomvothecoder in #299
• Match variables handler on compatible frequency and raw variables by @tomvothecoder in #302

Bug Fixes

• Fix logger and CMOR logs directory used by MPAS handlers by @tomvothecoder in #301

DevOps

• Add generic run script for testing changes at runtime by @tomvothecoder in #285

New Contributors

• @mingxuanwupnnl made their first contribution in #262

Full Changelog: v1.11.3...v1.12.0

v1.11.3

What's Changed

Bug Fixes

• fix table/freq ambiguity for multi-frequency variables by @TonyB9000 in #252
• removed lock= setting from xarray.open_mfdataset in mpas.py by @TonyB9000 in #258
• Fix redundant _FillValue attribute for MPAS fields by @xylar in #259
• Remove positive from hfsifrazil by @xylar in #278
• Fix masking of 3D MPAS-Ocean variables by @xylar in #270

Documentation

• Update README.md by @chengzhuzhang in #265

Refactor

• Additional refactoring of cmor setup for specific variables (areacella, clisccp, orog, sftlf) by @TonyB9000 in #276
• Consolidate cmor setup 273 by @TonyB9000 in #275

DevOps

• Update build workflow by @tomvothecoder in #271
• Tweak behaviours of build workflow by @altheaden in #280
• Update CI/CD tooling, pre-commit hooks, and build workflow by @tomvothecoder in #282

New Contributors

• @altheaden made their first contribution in #280

Full Changelog: v1.11.2...v1.11.3

v1.11.2

What's Changed

Bug Fixes

• Explicitly close xr.Dataset in VarHandler.cmorize() by @tomvothecoder in #244
• Update parallel=False in open_mfdataset() to avoid NetCDF: Not a Valid ID error in #247

Internal Enhancements

• Revised e3sm_to_cmip --info handling. Details within. by @TonyB9000 in #199

Documentation

• Update README.md by @chengzhuzhang in #239

Full Changelog: v1.11.1...v1.11.2

v1.11.2rc2

What's Changed

Bug Fixes

• Explicitly close xr.Dataset in VarHandler.cmorize() by @tomvothecoder in #244
• Update parallel=False in open_mfdataset() to avoid NetCDF: Not a Valid ID error in #247

Internal Enhancements

• Revised e3sm_to_cmip --info handling. Details within. by @TonyB9000 in #199

Documentation

• Update README.md by @chengzhuzhang in #239

Full Changelog: v1.11.1...v1.11.2rc2