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Minor fixes to EAMxx RRM example run script #189

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Minor fixes to EAMxx RRM example run script #189

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07b775d
Minor changes EAMxx variable
bishtgautam Jul 21, 2025
a4e9350
Changes addition of EAMxx output files to comment
bishtgautam Jul 21, 2025
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17 changes: 10 additions & 7 deletions run_scripts/RRM_example_scripts/SCREAMv1-nudging.CAx32v1pg2.pm-gpu.template.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -40,11 +40,9 @@ readonly Q=regular
readonly COMPSET="F2010-SCREAMv1"
readonly RESOLUTION="CAx32v1pg2_CAx32v1pg2"

# Directory to where your YAML (output) files are located. Do a search for "YAML_ROOT"
# to find the location in this script where you will specify the individual files.
readonly YAML_ROOT="/global/homes/b/bogensch/scream_v1_scripts/yaml_output_files"
# Define the path to your sample EAMxx output yaml files
# readonly YAML_ROOT="<path-to-your-output-yaml-fies>"

# Directory where your nudging data is located
readonly NUDGING_ROOT="/pscratch/sd/z/zhang73/DATA/data_hiccup/L128.mono_CAx32v1pg2.UVTQ.pres.cdsnew.240929/"

# Directory where your code is
Expand Down Expand Up @@ -365,7 +363,7 @@ runtime_options() {

# Set nudging
./case.setup
./atmchange mac_aero_mic::atm_procs_list=tms,shoc,cldFraction,spa,p3,nudging
./atmchange mac_aero_mic::atm_procs_list=tms,shoc,cld_fraction,spa,p3,nudging
./case.setup
# make sure that ``time'' is set to unlimited o/w we'll receive SIGSEGV: "invalid memory reference without other clues"
./atmchange physics::mac_aero_mic::nudging::nudging_filenames_patterns=${NUDGING_ROOT}/HICCUP.atm_era5.20100???_??.mono_CAx32v1pg2.L128.nc
Expand Down Expand Up @@ -448,8 +446,13 @@ runtime_options() {
exit 380
fi

cp ${YAML_ROOT}"/scream_output.monthly.yaml" .
./atmchange output_yaml_files="./scream_output.monthly.yaml"
# Copy the EAMxx output yaml files and add them via ./atmchange
#
# cp ${YAML_ROOT}"/output-1.yaml" .
# cp ${YAML_ROOT}"/output-2.yaml" .
#
# ./atmchange output_yaml_files="./output-1.yaml"
# ./atmchange output_yaml_files+="./output-2.yaml"

popd
}
Expand Down