Adds ruby/dane

mache/discover.py

@@ -30,7 +30,9 @@ def discover_machine(quiet=False):
         r'^compy': 'compy',
         r'^n\d{4}': 'anvil',
         r'^cooley': 'cooley',
-        r'^polaris': 'polaris'
+        r'^polaris': 'polaris',
+        r'^dane\d{1,4}': 'dane',
+        r'^ruby\d{1,4}': 'ruby',
     }
     for host_re, mach in machines_by_host_re.items():
         p = re.compile(host_re)

mache/machines/dane.cfg

@@ -0,0 +1,72 @@
+# Options related to deploying an e3sm-unified conda environment on supported
+# machines
+[e3sm_unified]
+
+# the unix group for permissions for the e3sm-unified conda environment
+group = e3sm
+
+# the compiler set to use for system libraries and MPAS builds
+compiler = intel
+
+# the system MPI library to use for intel18 compiler
+mpi = mvapich2
+
+# the path to the directory where activation scripts, the base environment, and
+# system libraries will be deployed
+base_path = /usr/workspace/e3sm/apps/e3sm-unified
+
+
+# config options related to data needed by diagnostics software such as
+# e3sm_diags and MPAS-Analysis
+[diagnostics]
+
+# The base path to the diagnostics directory
+base_path = /usr/workspace/e3sm/data/diagnostics
+
+# the unix group for permissions for diagnostics
+group = e3sm
+
+
+# config options associated with web portals
+[web_portal]
+
+# The path to the base of the web portals
+base_path = /usr/global/web-pages/lc/www/e3sm/diagnostic_output
+
+# The base URL that corresponds to the base path
+base_url = https://lc.llnl.gov/e3sm/diagnostic_output
+
+
+# The parallel section describes options related to running jobs in parallel
+[parallel]
+
+# parallel system of execution: slurm, cobalt or single_node
+system = slurm
+
+# whether to use mpirun or srun to run a task
+parallel_executable = srun
+
+# cores per node on the machine
+cores_per_node = 112
+
+# available partition(s) (default is the first)
+partitions = pbatch, pdebug
+
+
+# Config options related to spack environments
+[spack]
+
+# whether to load modules from the spack yaml file before loading the spack
+# environment
+modules_before = True
+
+# whether to load modules from the spack yaml file after loading the spack
+# environment
+modules_after = False
+
+
+# config options related to synchronizing files
+[sync]
+
+# the full hostname of the machine
+hostname = dane.llnl.gov

mache/machines/ruby.cfg

@@ -0,0 +1,72 @@
+# Options related to deploying an e3sm-unified conda environment on supported
+# machines
+[e3sm_unified]
+
+# the unix group for permissions for the e3sm-unified conda environment
+group = e3sm
+
+# the compiler set to use for system libraries and MPAS builds
+compiler = intel
+
+# the system MPI library to use for intel18 compiler
+mpi = mvapich2
+
+# the path to the directory where activation scripts, the base environment, and
+# system libraries will be deployed
+base_path = /usr/workspace/e3sm/apps/e3sm-unified
+
+
+# config options related to data needed by diagnostics software such as
+# e3sm_diags and MPAS-Analysis
+[diagnostics]
+
+# The base path to the diagnostics directory
+base_path = /usr/workspace/e3sm/data/diagnostics
+
+# the unix group for permissions for diagnostics
+group = e3sm
+
+
+# config options associated with web portals
+[web_portal]
+
+# The path to the base of the web portals
+base_path = /usr/global/web-pages/lc/www/e3sm/diagnostic_output
+
+# The base URL that corresponds to the base path
+base_url = https://lc.llnl.gov/e3sm/diagnostic_output
+
+
+# The parallel section describes options related to running jobs in parallel
+[parallel]
+
+# parallel system of execution: slurm, cobalt or single_node
+system = slurm
+
+# whether to use mpirun or srun to run a task
+parallel_executable = srun
+
+# cores per node on the machine
+cores_per_node = 56
+
+# available partition(s) (default is the first)
+partitions = pbatch, pdebug
+
+
+# Config options related to spack environments
+[spack]
+
+# whether to load modules from the spack yaml file before loading the spack
+# environment
+modules_before = True
+
+# whether to load modules from the spack yaml file after loading the spack
+# environment
+modules_after = False
+
+
+# config options related to synchronizing files
+[sync]
+
+# the full hostname of the machine
+hostname = ruby.llnl.gov

mache/spack/dane_intel_mvapich2.yaml

@@ -0,0 +1,177 @@
+spack:
+  specs:
+  - intel-oneapi-compilers
+  - mvapich2
+{% if e3sm_lapack %}
+  - intel-oneapi-mkl
+{% endif %}
+{% if e3sm_hdf5_netcdf %}
+  - hdf5
+  - netcdf-c
+  - netcdf-fortran
+  - parallel-netcdf
+{% endif %}
+{{ specs }}
+  concretizer:
+    unify: true
+  packages:
+    all:
+      compiler: [[email protected]]
+      providers:
+        mpi: [[email protected]]
+{% if e3sm_lapack %}
+        lapack: [[email protected]]
+{% endif %}
+{% if e3sm_hdf5_netcdf %}
+    hdf5:
+      externals:
+      - spec: [email protected]+cxx+fortran+hl~java+mpi~szip+threadsafe+tools api=v18
+        prefix: /usr/tce/packages/hdf5/hdf5-1.14.0-mvapich2-2.3.7-intel-classic-2021.6.0
+        modules:
+        - hdf5-parallel/1.14.0
+      buildable: false
+    netcdf-c:
+      externals:
+      - spec: [email protected]+mpi~parallel-netcdf
+        prefix: /usr/tce/packages/netcdf-c/netcdf-c-4.9.0-mvapich2-2.3.7-intel-classic-2021.6.0
+        modules:
+        - netcdf-c-parallel/4.9.0+shared+parallel-netcdf+hdf4
+      buildable: false
+    netcdf-fortran:
+      externals:
+      - spec: [email protected]
+        prefix: /usr/tce/packages/netcdf-fortran/netcdf-fortran-4.6.0-mvapich2-2.3.7-intel-classic-2021.6.0
+        modules:
+        - netcdf-fortran-parallel/4.6.0
+      buildable: false
+    parallel-netcdf:
+      externals:
+      - spec: [email protected]+cxx+fortran
+        prefix: /usr/tce/packages/parallel-netcdf/parallel-netcdf-1.12.3-mvapich2-2.3.7-intel-classic-2021.6.0
+        modules:
+        - parallel-netcdf/1.12.3
+      buildable: false
+{% endif %}
+    bison:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    flex:
+      externals:
+      - spec: [email protected]+lex
+        prefix: /usr
+      buildable: false
+    perl:
+      externals:
+      - spec: [email protected]+cpanm+opcode+open+shared+threads
+        prefix: /usr
+      buildable: false
+    automake:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    autoconf:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    m4:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    libtool:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    bzip2:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    pkgconf:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    openssl:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    gmake:
+      externals:
+      - spec: [email protected]
+        prefix: /usr
+      buildable: false
+    cmake:
+      externals:
+      - spec: [email protected]
+        prefix: /usr/tce
+      buildable: false
+    curl:
+      externals:
+      - spec: [email protected]+gssapi+ldap+nghttp2
+        prefix: /usr
+      buildable: false
+    mvapich2:
+      externals:
+      - spec: [email protected]~cuda~debug+regcache+wrapperrpath ch3_rank_bits=32 file_systems=lustre,nfs,ufs
+          process_managers=hydra threads=multiple
+        prefix: /usr/tce/packages/mvapich2/mvapich2-2.3.7-intel-classic-2021.6.0-magic
+        modules:
+        - mvapich2/2.3.7
+        - mvapich2-tce/2.3.7
+      buildable: false
+    intel-oneapi-compilers:
+      externals:
+      - spec: [email protected]
+        prefix: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic
+        extra_attributes:
+          compilers:
+            c: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/icc
+            cxx: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/icpc
+            fortran: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/ifort
+        modules:
+        - StdEnv
+        - intel-classic/2021.6.0-magic
+      buildable: false
+    gcc:
+      externals:
+      - spec: [email protected] languages='c,c++,fortran'
+        prefix: /usr/tce
+        extra_attributes:
+          compilers:
+            c: /usr/tce/bin/gcc
+            cxx: /usr/tce/bin/g++
+            fortran: /usr/tce/bin/gfortran
+{% if e3ms_lapack %}
+    intel-oneapi-mkl:
+      externals:
+      - spec: [email protected]
+        prefix: /usr/tce/packages/mkl/mkl-2022.1.0
+        modules:
+        - mkl/2022.1.0
+      buildable: false
+{% endif %}
+  config:
+    install_missing_compilers: false
+  compilers:
+  - compiler:
+      spec: intel-oneapi-compilers@=2021.6.0
+      paths:
+        cc: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/icc
+        cxx: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/icpc
+        f77: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/ifort
+        fc: /usr/tce/packages/intel-classic/intel-classic-2021.6.0-magic/bin/ifort
+      flags: {}
+      operating_system: rhel8
+      target: x86_64
+      modules:
+      - StdEnv
+      - intel-classic/2021.6.0-magic
+      environment: {}
+      extra_rpaths: []