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csv and json outputs

Status: Open.

#11 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 22, 2026

publish to pypi

Status: Open.

#10 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 22, 2026

host docs on readthedocs

Status: Open.

#9 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 22, 2026

jupyter tutorials for using

Status: Open.

#8 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 22, 2026

anndata outputs

enhancementNew feature or requestNew feature or request

Status: Open.

#7 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026

pd outputs

Status: Open.

#6 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026

download checkpoints, resume and progress bar

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026

parallelize downloads

enhancementNew feature or requestNew feature or request

Status: Open.

#4 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026

openapi-python-client / swagger-codegen

Status: Open.

#3 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026

incorporate schemas

Status: Open.

#2 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026

init mgnify client

Status: Open.

#1 In EBI-Metagenomics/mgnipy;

· angelphanth opened on Jan 20, 2026