During the senior year of my undergraduate studies, I did an traineeship in which I designed, developed, tested, benchmarked and deployed a bioinformatics pipeline for mass spectrometry-based proteomics data processing in a core facility setting. This repo contains the code and results of the benchmarking. To view the knitted webpage in your browser go to this URL.
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Mini-benchmark of the Nextflow pipeline for MS-proteomics I did from my senior year undergrad traineeship
EfraMP/pipeline-mini-benchmark
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Mini-benchmark of the Nextflow pipeline for MS-proteomics I did from my senior year undergrad traineeship