Releases: Ekin-Kahraman/single-cell-rnaseq-immune-profiling
Releases · Ekin-Kahraman/single-cell-rnaseq-immune-profiling
v1.0.0
Initial release. Complete scanpy pipeline for PBMC 3k analysis:
- 6-step pipeline: QC, preprocessing, PCA/UMAP, clustering, annotation, figures
- Automated cell type annotation via marker gene scoring
- Multi-resolution Leiden clustering with silhouette evaluation
- 7 pytest tests, CI on Python 3.11/3.12
- Animated 3D UMAP visualisation