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Releases: Ekin-Kahraman/single-cell-rnaseq-immune-profiling

v1.0.0

23 Mar 18:33

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Initial release. Complete scanpy pipeline for PBMC 3k analysis:

  • 6-step pipeline: QC, preprocessing, PCA/UMAP, clustering, annotation, figures
  • Automated cell type annotation via marker gene scoring
  • Multi-resolution Leiden clustering with silhouette evaluation
  • 7 pytest tests, CI on Python 3.11/3.12
  • Animated 3D UMAP visualisation