GitHub - Emask7/AM14_with_B1-8_comparison: Analyzing data from AM14 and B1-8 adoptive transfers

Emask7 / AM14_with_B1-8_comparison Public

Analyzing data from AM14 and B1-8 adoptive transfers

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 66 Commits
ABC_gsea		ABC_gsea
AM14_MRLlpr_no_outlier		AM14_MRLlpr_no_outlier
analysis_all_cohorts		analysis_all_cohorts
analysis_with_cohorts_and_treatment_separated		analysis_with_cohorts_and_treatment_separated
analysis_with_cohorts_separated		analysis_with_cohorts_separated
analysis_with_higher_cutoffs		analysis_with_higher_cutoffs
old_code_and_results-DO_NOT_RUN		old_code_and_results-DO_NOT_RUN
pathway_analyses		pathway_analyses
pathway_gene_lists		pathway_gene_lists
raw_data		raw_data
.DS_Store		.DS_Store
.RDataTmp1		.RDataTmp1
.RDataTmp2		.RDataTmp2
.RDataTmp3		.RDataTmp3
.gitignore		.gitignore
AM14_with_B1-8_comparison.Rproj		AM14_with_B1-8_comparison.Rproj
DESeq2_functions.R		DESeq2_functions.R
Packages.R		Packages.R
README.R		README.R
Thumbs.db		Thumbs.db
data_visualization_functions.R		data_visualization_functions.R
formatting_IPA_input.R		formatting_IPA_input.R

Repository files navigation

# Order to run code in:
#   1. Packages.R
#   2. DESeq2_functions.R
#   3. DESeq2.R
#       Note: Don't need to run DESeq2_PL23vsNP.R
#   4.

Analyzing data from AM14 and B1-8 adoptive transfers

No releases published

No packages published