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cwl and personal R libraries

bug

enhancement

Status: Open.

#43 In Epigenomics-Screw/Screw;

· sibylgisela opened on Oct 22, 2017

Visualise DNA methylation per library for a specified region

enhancement

Status: Open.

#38 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Use ChipSeekR to visualise DMRs

Status: Open.

#37 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Make heatmap from regional methylation output

enhancement

Status: Open.

#36 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Create a complete workflow for the analysis of the Smallwood 2014 data

Status: Open.

#34 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Create a complete workflow for analysis of the Guo 2013 data

analysis

Status: Open.

#32 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Create a complete workflow for analysis of the Farlik 2015 data

analysis

Status: Open.

#31 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Create a complete workflow for the Farlik 2016 data set

analysis

Status: Open.

#30 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Calculate average DNA methylation across regions of interest

enhancement

Status: Open.

#29 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 20, 2017

Hackseq 2017 hackathon logistics

discussion

Status: Open.

#27 In Epigenomics-Screw/Screw;

· oneillkza opened on Oct 19, 2017

Connect preProcess.cwl to pairwise-distance.cwl

enhancement

Status: Open.

#26 In Epigenomics-Screw/Screw;

· oneillkza opened on Jul 25, 2017

Call DMRs from pooled libraries using DSS

enhancement

Status: Open.

#12 In Epigenomics-Screw/Screw;

· oneillkza opened on Apr 4, 2017